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Phytophthora database 2.0: update and future direction.

Overview of attention for article published in Phytopathology, December 2013
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61 Mendeley
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Article details
Title
Phytophthora database 2.0: update and future direction.
Published in
Phytopathology, December 2013
DOI 10.1094/phyto-01-13-0023-r
Pubmed ID
Authors
Abstract

The online community resource Phytophthora database (PD) was developed to support accurate and rapid identification of Phytophthora and to help characterize and catalog the diversity and evolutionary relationships within the genus. Since its release in 2008, the sequence database has grown to cover 1 to 12 loci for ≈2,600 isolates (representing 138 described and provisional species). Sequences of multiple mitochondrial loci were added to complement nuclear loci-based phylogenetic analyses and diagnostic tool development. Key characteristics of most newly described and provisional species have been summarized. Other additions to improve the PD functionality include: (i) geographic information system tools that enable users to visualize the geographic origins of chosen isolates on a global-scale map, (ii) a tool for comparing genetic similarity between isolates via microsatellite markers to support population genetic studies, (iii) a comprehensive review of molecular diagnostics tools and relevant references, (iv) sequence alignments used to develop polymerase chain reaction-based diagnostics tools to support their utilization and new diagnostic tool development, and (v) an online community forum for sharing and preserving experience and knowledge accumulated in the global Phytophthora community. Here we present how these improvements can support users and discuss the PD's future direction.

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Mendeley demographics

Mendeley demographics

The data shown below were compiled from readership statistics for 61 Mendeley readers of this research output. Click here to see the associated Mendeley record.
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Geographical breakdown

Geographical breakdown
Country Count As %
United States 2 3%
Finland 1 2%
Ecuador 1 2%
Colombia 1 2%
Unknown 56 92%

Demographic breakdown

Readers by professional status
Readers by professional status Count As %
Researcher 19 31%
Student > Ph. D. Student 11 18%
Professor 6 10%
Student > Master 6 10%
Student > Doctoral Student 5 8%
Other 7 11%
Unknown 7 11%
Readers by discipline
Readers by discipline Count As %
Agricultural and Biological Sciences 44 72%
Biochemistry, Genetics and Molecular Biology 4 7%
Environmental Science 2 3%
Business, Management and Accounting 1 2%
Nursing and Health Professions 1 2%
Other 1 2%
Unknown 8 13%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 13 November 2013.
All research outputs
#23,362,735
of 28,574,713 outputs
Outputs from Phytopathology
#2,881
of 3,271 outputs
Outputs of similar age
#261,365
of 333,623 outputs
Outputs of similar age from Phytopathology
#10
of 13 outputs
Altmetric has tracked 28,574,713 research outputs across all sources so far. This one is in the 9th percentile – i.e., 9% of other outputs scored the same or lower than it.
So far Altmetric has tracked 3,271 research outputs from this source. They typically receive a little more attention than average, with a mean Attention Score of 5.4. This one is in the 6th percentile – i.e., 6% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 333,623 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 11th percentile – i.e., 11% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 13 others from the same source and published within six weeks on either side of this one. This one is in the 7th percentile – i.e., 7% of its contemporaries scored the same or lower than it.