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Peptide and Protein Dynamics and Low-Temperature/DNP Magic Angle Spinning NMR

Overview of attention for article published in Journal of Physical Chemistry B, May 2017
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Article details
Title
Peptide and Protein Dynamics and Low-Temperature/DNP Magic Angle Spinning NMR
Published in
Journal of Physical Chemistry B, May 2017
DOI 10.1021/acs.jpcb.7b02066
Pubmed ID
Authors
Abstract

In DNP MAS NMR experiments at ~80-110 K, the structurally important -13CH3 and -15NH3+ signals in MAS spectra of biological samples disappear due to the interference of the molecular motions with the 1H decoupling. Here we investigate the effect of these dynamic processes on the NMR lineshapes and signal intensities in several typical systems: (1) microcrystalline APG, (2) membrane protein bR, (3) amyloid fibrils PI3-SH3, (4) monomeric alanine-CD3 and (5) the pro-tonated and deuterated dipeptide N-Ac-VL over 78-300 K. In APG, the 3-site hopping of the Ala-Cβ peak disappears com-pletely at 112 K, concomitant with the attenuation of CP signals from other 13C's and 15N's. Similarly, the 15N signal from Ala-NH3+ disappears ~173 K, concurrent with the attenuation in CP experiments of other 15N's as well as 13C's. In bR and PI3-SH3, the methyl groups are attenuated at ~95 K while all other 13C's remain unaffected. However, both systems exhibit substantial losses of intensity at ~243 K. Finally, with spectra of Ala and N-Ac-VL we show that it is possible to extract site specific dynamic data from the temperature dependence of the intensity losses. Furthermore, 2H labeling can assist with re-covering the spectral intensity. Thus, our study provides insight into the dynamic behavior of biological systems over a wide range of temperatures, and serves as a guide to optimizing the sensitivity and resolution of structural data in low temperature DNP MAS NMR spectra.

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X Demographics

X Demographics

The data shown below were collected from the profile of 1 X user who shared this research output. Click here to find out more about how the information was compiled.
Mendeley demographics

Mendeley demographics

The data shown below were compiled from readership statistics for 84 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Geographical breakdown
Country Count As %
Unknown 84 100%

Demographic breakdown

Readers by professional status
Readers by professional status Count As %
Student > Ph. D. Student 18 21%
Researcher 17 20%
Professor > Associate Professor 6 7%
Other 4 5%
Student > Master 4 5%
Other 7 8%
Unknown 28 33%
Readers by discipline
Readers by discipline Count As %
Chemistry 35 42%
Biochemistry, Genetics and Molecular Biology 7 8%
Physics and Astronomy 5 6%
Agricultural and Biological Sciences 3 4%
Mathematics 1 1%
Other 1 1%
Unknown 32 38%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 2. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 28 August 2017.
All research outputs
#23,302,843
of 34,372,222 outputs
Outputs from Journal of Physical Chemistry B
#10,693
of 17,742 outputs
Outputs of similar age
#225,899
of 356,564 outputs
Outputs of similar age from Journal of Physical Chemistry B
#62
of 221 outputs
Altmetric has tracked 34,372,222 research outputs across all sources so far. This one is in the 30th percentile – i.e., 30% of other outputs scored the same or lower than it.
So far Altmetric has tracked 17,742 research outputs from this source. They receive a mean Attention Score of 3.5. This one is in the 37th percentile – i.e., 37% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 356,564 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 34th percentile – i.e., 34% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 221 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 70% of its contemporaries.