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A Practical Computational Approach to Study Molecular Instability Using the Pseudo-Jahn–Teller Effect

Overview of attention for article published in Journal of Chemical Theory and Computation, March 2014
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Title
A Practical Computational Approach to Study Molecular Instability Using the Pseudo-Jahn–Teller Effect
Published in
Journal of Chemical Theory and Computation, March 2014
DOI 10.1021/ct4011097
Pubmed ID
Authors

Pablo García-Fernández, Jose Antonio Aramburu, Miguel Moreno, Matija Zlatar, Maja Gruden-Pavlović

Abstract

Vibronic coupling theory shows that the cause for spontaneous instability in systems presenting a nondegenerate ground state is the so-called pseudo-Jahn-Teller effect, and thus its study can be extremely helpful to understand the structure of many molecules. While this theory, based on the mixing of the ground and excited states with a distortion, has been long studied, there are two obscure points that we try to clarify in the present work. First, the operators involved in both the vibronic and nonvibronic parts of the force constant take only into account electron-nuclear and nuclear-nuclear interactions, apparently leaving electron-electron repulsions and the electron's kinetic energy out of the chemical picture. Second, a fully quantitative computational appraisal of this effect has been up to now problematic. Here, we present a reformulation of the pseudo-Jahn-Teller theory that explicitly shows the contributions of all operators in the molecular Hamiltonian and allows connecting the results obtained with this model to other chemical theories relating electron distribution and geometry. Moreover, we develop a practical approach based on Hartree-Fock and density functional theory that allows quantification of the pseudo-Jahn-Teller effect. We demonstrate the usefulness of our method studying the pyramidal distortion in ammonia and its absence in borane, revealing the strong importance of the kinetic energy of the electrons in the lowest a2″ orbital to trigger this instability. The present tool opens a window for exploring in detail the actual microscopic origin of structural instabilities in molecules and solids.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 16 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 16 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 7 44%
Student > Ph. D. Student 3 19%
Professor > Associate Professor 2 13%
Student > Master 2 13%
Unknown 2 13%
Readers by discipline Count As %
Chemistry 6 38%
Physics and Astronomy 3 19%
Agricultural and Biological Sciences 1 6%
Chemical Engineering 1 6%
Materials Science 1 6%
Other 0 0%
Unknown 4 25%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 14 April 2014.
All research outputs
#19,203,583
of 24,452,844 outputs
Outputs from Journal of Chemical Theory and Computation
#4,924
of 7,136 outputs
Outputs of similar age
#158,280
of 226,133 outputs
Outputs of similar age from Journal of Chemical Theory and Computation
#58
of 137 outputs
Altmetric has tracked 24,452,844 research outputs across all sources so far. This one is in the 18th percentile – i.e., 18% of other outputs scored the same or lower than it.
So far Altmetric has tracked 7,136 research outputs from this source. They receive a mean Attention Score of 4.0. This one is in the 22nd percentile – i.e., 22% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 226,133 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 26th percentile – i.e., 26% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 137 others from the same source and published within six weeks on either side of this one. This one is in the 43rd percentile – i.e., 43% of its contemporaries scored the same or lower than it.