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An open-source toolbox for automated phenotyping of mice in behavioral tasks

Overview of attention for article published in Frontiers in Behavioral Neuroscience, October 2014
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About this Attention Score

  • In the top 25% of all research outputs scored by Altmetric
  • Good Attention Score compared to outputs of the same age (78th percentile)
  • Good Attention Score compared to outputs of the same age and source (75th percentile)

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1 X user
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3 patents
reddit
1 Redditor

Readers on

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199 Mendeley
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1 CiteULike
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Article details
Title
An open-source toolbox for automated phenotyping of mice in behavioral tasks
Published in
Frontiers in Behavioral Neuroscience, October 2014
DOI 10.3389/fnbeh.2014.00349
Pubmed ID
Authors
Abstract

Classifying behavior patterns in mouse models of neurological, psychiatric and neurodevelopmental disorders is critical for understanding disease causality and treatment. However, complete characterization of behavior is time-intensive, prone to subjective scoring, and often requires specialized equipment. Although several reports describe automated home-cage monitoring and individual task scoring methods, we report the first open source, comprehensive toolbox for automating the scoring of several common behavior tasks used by the neuroscience community. We show this new toolbox is robust and achieves equal or better consistency when compared to manual scoring methods. We use this toolbox to study the alterations in behavior that occur following blast-induced traumatic brain injury (bTBI), and study if these behavior patterns are altered following genetic deletion of the transcription factor Ets-like kinase 1 (Elk-1). Due to the role of Elk-1 in neuronal survival and proposed role in synaptic plasticity, we hypothesized that Elk-1 deletion would improve some neurobehavioral deficits, while impairing others, following blast exposure. In Elk-1 knockout (KO) animals, deficits in open field, spatial object recognition (SOR) and elevated zero maze performance after blast exposure disappeared, while new significant deficits appeared in spatial and associative memory. These are the first data suggesting a molecular mediator of anxiety deficits following bTBI, and represent the utility of the broad screening tool we developed. More broadly, we envision this open-source toolbox will provide a more consistent and rapid analysis of behavior across many neurological diseases, promoting the rapid discovery of novel pathways mediating disease progression and treatment.

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X Demographics

The data shown below were collected from the profile of 1 X user who shared this research output. Click here to find out more about how the information was compiled.
Mendeley demographics

Mendeley demographics

The data shown below were compiled from readership statistics for 199 Mendeley readers of this research output. Click here to see the associated Mendeley record.
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Geographical breakdown

Geographical breakdown
Country Count As %
United Kingdom 2 1%
United States 1 <1%
Japan 1 <1%
Israel 1 <1%
Spain 1 <1%
Germany 1 <1%
Switzerland 1 <1%
Unknown 191 96%

Demographic breakdown

Readers by professional status
Readers by professional status Count As %
Student > Ph. D. Student 58 29%
Researcher 41 21%
Student > Master 17 9%
Student > Doctoral Student 11 6%
Student > Bachelor 11 6%
Other 21 11%
Unknown 40 20%
Readers by discipline
Readers by discipline Count As %
Neuroscience 59 30%
Agricultural and Biological Sciences 45 23%
Medicine and Dentistry 16 8%
Psychology 9 5%
Engineering 8 4%
Other 15 8%
Unknown 47 24%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 7. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 11 August 2026.
All research outputs
#7,158,141
of 34,226,562 outputs
Outputs from Frontiers in Behavioral Neuroscience
#918
of 3,876 outputs
Outputs of similar age
#64,542
of 300,056 outputs
Outputs of similar age from Frontiers in Behavioral Neuroscience
#22
of 94 outputs
Altmetric has tracked 34,226,562 research outputs across all sources so far. Compared to these this one has done well and is in the 78th percentile: it's in the top 25% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 3,876 research outputs from this source. They typically receive a lot more attention than average, with a mean Attention Score of 14.0. This one has done well, scoring higher than 76% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 300,056 tracked outputs that were published within six weeks on either side of this one in any source. This one has done well, scoring higher than 78% of its contemporaries.
We're also able to compare this research output to 94 others from the same source and published within six weeks on either side of this one. This one has done well, scoring higher than 75% of its contemporaries.