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Next generation sequencing of microbial transcriptomes: challenges and opportunities

Overview of attention for article published in FEMS Microbiology Letters, August 2009
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About this Attention Score

  • In the top 25% of all research outputs scored by Altmetric
  • High Attention Score compared to outputs of the same age (84th percentile)
  • High Attention Score compared to outputs of the same age and source (82nd percentile)

Mentioned by

patent
2 patents
wikipedia
4 Wikipedia pages

Readers on

mendeley
713 Mendeley
citeulike
7 CiteULike
connotea
3 Connotea
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Article details
Title
Next generation sequencing of microbial transcriptomes: challenges and opportunities
Published in
FEMS Microbiology Letters, August 2009
DOI 10.1111/j.1574-6968.2009.01767.x
Pubmed ID
Authors
Abstract

Over the past 15 years, microbial functional genomics has been made possible by the combined power of genome sequencing and microarray technology. However, we are now approaching the technical limits of microarray technology, and microarrays are now being superseded by transcriptomics based on high-throughput (next generation) DNA-sequencing technologies. The term RNA-seq has been coined to represent transcriptomics by next-generation sequencing. Although pioneered on eukaryotic organisms due to the relative ease of working with eukaryotic mRNA, the RNA-seq technology is now being ported to microbial systems. This review will discuss the opportunities of RNA-seq transcriptome sequencing for microorganisms, and also aims to identify challenges and pitfalls of the use of this new technology in microorganisms.

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Timeline Attention over time Attention Score history
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Mendeley demographics

Mendeley demographics

The data shown below were compiled from readership statistics for 713 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Geographical breakdown
Country Count As %
United States 25 4%
France 5 <1%
United Kingdom 5 <1%
Belgium 4 <1%
Brazil 4 <1%
Denmark 4 <1%
Portugal 3 <1%
Spain 3 <1%
Argentina 2 <1%
Other 24 3%
Unknown 634 89%

Demographic breakdown

Readers by professional status
Readers by professional status Count As %
Researcher 182 26%
Student > Ph. D. Student 180 25%
Student > Master 75 11%
Student > Bachelor 47 7%
Professor > Associate Professor 41 6%
Other 137 19%
Unknown 51 7%
Readers by discipline
Readers by discipline Count As %
Agricultural and Biological Sciences 444 62%
Biochemistry, Genetics and Molecular Biology 80 11%
Immunology and Microbiology 27 4%
Environmental Science 24 3%
Medicine and Dentistry 23 3%
Other 50 7%
Unknown 65 9%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 9. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 01 June 2021.
All research outputs
#4,678,750
of 31,591,940 outputs
Outputs from FEMS Microbiology Letters
#463
of 6,505 outputs
Outputs of similar age
#18,374
of 150,076 outputs
Outputs of similar age from FEMS Microbiology Letters
#2
of 28 outputs
Altmetric has tracked 31,591,940 research outputs across all sources so far. Compared to these this one has done well and is in the 83rd percentile: it's in the top 25% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 6,505 research outputs from this source. They receive a mean Attention Score of 4.9. This one has done well, scoring higher than 88% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 150,076 tracked outputs that were published within six weeks on either side of this one in any source. This one has done well, scoring higher than 84% of its contemporaries.
We're also able to compare this research output to 28 others from the same source and published within six weeks on either side of this one. This one has done well, scoring higher than 82% of its contemporaries.