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An evaluation of the operational model when applied to quantify functional selectivity

Overview of attention for article published in British Journal of Pharmacology, March 2018
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Article details
Title
An evaluation of the operational model when applied to quantify functional selectivity
Published in
British Journal of Pharmacology, March 2018
DOI 10.1111/bph.14171
Pubmed ID
Authors
Abstract

Functional selectivity describes the ability of ligands to differentially regulate multiple signalling pathways when coupled to a single receptor and the operational model is commonly used to analyse these data. Here, we assess the mathematical properties of the operational model and evaluate the impact of fixing parameters on model performance. The operational model was evaluated using both a mathematical identifiability analysis and simulation. Mathematical analysis revealed that the parameters R0and KE, were not independently identifiable which can be solved by considering their ratio, τ. The ratio parameter, τ, was often imprecisely estimated when only functional assay data were available and generally only the transduction coefficient R (τ/KA) could be estimated precisely. The general operational model (that includes baseline and the Hill coefficient) required either the parameters Emor KAto be fixed. The normalisation process largely cancelled out the mean error of the calculated ∆ log (R) caused by fixing these parameters. From this analysis it was determined that we can avoid the need for a full agonist ligand to be included in an experiment to determine ∆ log (R). This analysis has provided a ready-to-use understanding of current methods for quantifying functional selectivity. It was determined that current methods are generally tolerant to fixing parameters. A new method was proposed that removes the need for including a high efficacy ligand in any given experiment, which allows application to large-scale screening to identify compounds with desirable features of functional selectivity.

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Mendeley demographics

Mendeley demographics

The data shown below were compiled from readership statistics for 20 Mendeley readers of this research output. Click here to see the associated Mendeley record.
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Geographical breakdown

Geographical breakdown
Country Count As %
Unknown 20 100%

Demographic breakdown

Readers by professional status
Readers by professional status Count As %
Researcher 6 30%
Student > Doctoral Student 3 15%
Student > Bachelor 2 10%
Student > Ph. D. Student 2 10%
Professor 1 5%
Other 2 10%
Unknown 4 20%
Readers by discipline
Readers by discipline Count As %
Pharmacology, Toxicology and Pharmaceutical Science 9 45%
Biochemistry, Genetics and Molecular Biology 2 10%
Mathematics 1 5%
Medicine and Dentistry 1 5%
Neuroscience 1 5%
Other 1 5%
Unknown 5 25%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 2. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 31 March 2019.
All research outputs
#15,441,046
of 24,477,448 outputs
Outputs from British Journal of Pharmacology
#5,945
of 7,572 outputs
Outputs of similar age
#191,803
of 333,710 outputs
Outputs of similar age from British Journal of Pharmacology
#37
of 64 outputs
Altmetric has tracked 24,477,448 research outputs across all sources so far. This one is in the 34th percentile – i.e., 34% of other outputs scored the same or lower than it.
So far Altmetric has tracked 7,572 research outputs from this source. They typically receive more attention than average, with a mean Attention Score of 7.6. This one is in the 20th percentile – i.e., 20% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 333,710 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 39th percentile – i.e., 39% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 64 others from the same source and published within six weeks on either side of this one. This one is in the 37th percentile – i.e., 37% of its contemporaries scored the same or lower than it.