Secondary alveolar septa are mostly generated after birth in humans and in mice this is completely accomplished postnatally, when mechanical stresses vary as airspace pressure oscillates. Alveolar mesenchymal cells deposit elastic fibers which limit cellular strain, but while the elastic fiber network is incomplete, this function is also served by the intracellular cytoskeleton. Intermediate filament proteins support deformation during cellular division and migration, which occur during septal elongation. Because platelet-derived growth factor-alpha (PDGFRα) signaling is essential for alveolar septation, we hypothesized that neuropilin-1 (NRP1) may link PDGFRα to cytoskeletal deformation. During cell migration, NRP1 links receptor tyrosine kinase signaling to cytoskeletal and focal adhesion remodeling. Therefore, we examined the consequences of nrp1-gene deletion in alveolar mesenchymal cells, including myofibroblasts and pericytes. Neuropilin-1-depletion reduced the proportion of mesenchymal cells which contained nestin and desmin within the sub-population which lacked PDGFRα, but contained PDGFRβ. Desmin was reduced at alveolar entry rings, airspaces were enlarged, and the gas-exchange surface area was reduced after NRP1 depletion. PDGFRα and NRP1 co-localized to membrane lipid rafts, which are known to contain Src-kinase. Neuropilin-1depletion reduced alveolar mesenchymal cell migration and PDGF-A mediated activation of Src-kinase, which may limit the accumulation of desmin at septal tips (alveolar entry rings). Cooperation between Nrp1 and PDGF-signaling is required for secondary septation, and manipulating Nrp1 could promote alveolar regeneration without producing fibrosis.