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Circadian Rhythms and Biological Clocks, Part A

Overview of attention for book
Circadian Rhythms and Biological Clocks, Part A
Elsevier Science
Attention for Chapter: RNA-seq Profiling of Small Numbers of Drosophila Neurons.
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  • High Attention Score compared to outputs of the same age and source (87th percentile)

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87 Mendeley
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Article details
Chapter title
RNA-seq Profiling of Small Numbers of Drosophila Neurons.
Book title
Circadian Rhythms and Biological Clocks, Part A
Published in
Methods in enzymology, January 2015
DOI 10.1016/bs.mie.2014.10.025
Pubmed ID
Book ISBNs
978-0-12-801218-5
Authors

Katharine Abruzzi, Xiao Chen, Emi Nagoshi, Abby Zadina, Michael Rosbash

Abstract

Drosophila melanogaster has a robust circadian clock, which drives a rhythmic behavior pattern: locomotor activity increases in the morning shortly before lights on (M peak) and in the evening shortly before lights off (E peak). This pattern is controlled by ~75 pairs of circadian neurons in the Drosophila brain. One key group of neurons is the M-cells (PDF(+) large and small LNvs), which control the M peak. A second key group is the E-cells, consisting of four LNds and the fifth small LNv, which control the E peak. Recent studies show that the M-cells have a second role in addition to controlling the M peak; they communicate with the E-cells (as well as DN1s) to affect their timing, probably as a function of environmental conditions (Guo, Cerullo, Chen, & Rosbash, 2014). To learn about molecules within the M-cells important for their functional roles, we have adapted methods to manually sort fluorescent protein-expressing neurons of interest from dissociated Drosophila brains. We isolated mRNA and miRNA from sorted M-cells and amplified the resulting DNAs to create deep-sequencing libraries. Visual inspection of the libraries illustrates that they are specific to a particular neuronal subgroup; M-cell libraries contain timeless and dopaminergic cell libraries contain ple/TH. Using these data, it is possible to identify cycling transcripts as well as many mRNAs and miRNAs specific to or enriched in particular groups of neurons.

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Mendeley demographics

Mendeley demographics

The data shown below were compiled from readership statistics for 87 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Geographical breakdown
Country Count As %
United Kingdom 3 3%
Unknown 84 97%

Demographic breakdown

Readers by professional status
Readers by professional status Count As %
Student > Ph. D. Student 28 32%
Researcher 11 13%
Student > Master 8 9%
Student > Bachelor 5 6%
Student > Postgraduate 5 6%
Other 13 15%
Unknown 17 20%
Readers by discipline
Readers by discipline Count As %
Agricultural and Biological Sciences 28 32%
Neuroscience 21 24%
Biochemistry, Genetics and Molecular Biology 15 17%
Medicine and Dentistry 3 3%
Mathematics 1 1%
Other 3 3%
Unknown 16 18%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 6. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 25 January 2018.
All research outputs
#8,464,545
of 31,634,113 outputs
Outputs from Methods in enzymology
#2,006
of 5,678 outputs
Outputs of similar age
#90,521
of 390,428 outputs
Outputs of similar age from Methods in enzymology
#17
of 137 outputs
Altmetric has tracked 31,634,113 research outputs across all sources so far. This one has received more attention than most of these and is in the 73rd percentile.
So far Altmetric has tracked 5,678 research outputs from this source. They typically receive a little more attention than average, with a mean Attention Score of 5.1. This one has gotten more attention than average, scoring higher than 65% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 390,428 tracked outputs that were published within six weeks on either side of this one in any source. This one has done well, scoring higher than 76% of its contemporaries.
We're also able to compare this research output to 137 others from the same source and published within six weeks on either side of this one. This one has done well, scoring higher than 87% of its contemporaries.