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The Lophotrochozoan TGF-β signalling cassette - diversification and conservation in a key signalling pathway

Overview of attention for article published in International Journal of Developmental Biology, January 2014
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Article details
Title
The Lophotrochozoan TGF-β signalling cassette - diversification and conservation in a key signalling pathway
Published in
International Journal of Developmental Biology, January 2014
DOI 10.1387/ijdb.140080nk
Pubmed ID
Authors
Abstract

TGF-β signalling plays a key role in the patterning of metazoan body plans and growth. It is widely regarded as a 'module' capable of co-option into novel functions. The TGF-β pathway arose in the Metazoan lineage, and while it is generally regarded as well conserved across evolutionary time, its components have been largely studied in the Ecdysozoa and Deuterostomia. The recent discovery of the Nodal molecule in molluscs has underlined the necessity of untangling this signalling network in lophotrochozoans in order to truly comprehend the evolution, conservation and diversification of this key pathway. Three novel genome resources, the mollusc Patella vulgata, annelid Pomatoceros lamarcki and rotifer Brachionus plicatilis, along with other publicly available data, were searched for the presence of TGF-β pathway genes. Bayesian and Maximum Likelihood analyses, along with some consideration of conserved domain structure, was used to confirm gene identity. Analysis revealed conservation of key components within the canonical pathway, allied with extensive diversification of TGF-β ligands and partial loss of genes encoding pathway inhibitors in some lophotrochozoan lineages. We fully describe the TGF-β signalling cassette of a range of lophotrochozoans, allowing firm inference to be drawn as to the ancestral state of this pathway in this Superphylum. The TGF-β signalling cascade's reputation as being highly conserved across the Metazoa is reinforced. Diversification within the activin-like complement, as well as potential wide loss of regulatory steps in some Phyla, hint at specific evolutionary implications for aspects of this cascade's functionality in this Superphylum.

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The data shown below were compiled from readership statistics for 45 Mendeley readers of this research output. Click here to see the associated Mendeley record.
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Geographical breakdown

Geographical breakdown
Country Count As %
New Zealand 1 2%
United Kingdom 1 2%
Germany 1 2%
Chile 1 2%
Unknown 41 91%

Demographic breakdown

Readers by professional status
Readers by professional status Count As %
Student > Ph. D. Student 14 31%
Researcher 7 16%
Student > Bachelor 5 11%
Student > Master 5 11%
Professor 4 9%
Other 3 7%
Unknown 7 16%
Readers by discipline
Readers by discipline Count As %
Agricultural and Biological Sciences 22 49%
Biochemistry, Genetics and Molecular Biology 13 29%
Arts and Humanities 1 2%
Environmental Science 1 2%
Unknown 8 18%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 25 October 2015.
All research outputs
#21,802,561
of 27,583,736 outputs
Outputs from International Journal of Developmental Biology
#622
of 789 outputs
Outputs of similar age
#246,160
of 328,095 outputs
Outputs of similar age from International Journal of Developmental Biology
#42
of 53 outputs
Altmetric has tracked 27,583,736 research outputs across all sources so far. This one is in the 18th percentile – i.e., 18% of other outputs scored the same or lower than it.
So far Altmetric has tracked 789 research outputs from this source. They receive a mean Attention Score of 4.3. This one is in the 19th percentile – i.e., 19% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 328,095 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 22nd percentile – i.e., 22% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 53 others from the same source and published within six weeks on either side of this one. This one is in the 16th percentile – i.e., 16% of its contemporaries scored the same or lower than it.