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The structural basis of agonist-induced activation in constitutively active rhodopsin

Overview of attention for article published in Nature, March 2011
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About this Attention Score

  • In the top 25% of all research outputs scored by Altmetric
  • High Attention Score compared to outputs of the same age (93rd percentile)
  • Good Attention Score compared to outputs of the same age and source (65th percentile)

Readers on

mendeley
399 Mendeley
citeulike
3 CiteULike
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1 Connotea
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Article details
Title
The structural basis of agonist-induced activation in constitutively active rhodopsin
Published in
Nature, March 2011
DOI 10.1038/nature09795
Pubmed ID
Authors
Abstract

G-protein-coupled receptors (GPCRs) comprise the largest family of membrane proteins in the human genome and mediate cellular responses to an extensive array of hormones, neurotransmitters and sensory stimuli. Although some crystal structures have been determined for GPCRs, most are for modified forms, showing little basal activity, and are bound to inverse agonists or antagonists. Consequently, these structures correspond to receptors in their inactive states. The visual pigment rhodopsin is the only GPCR for which structures exist that are thought to be in the active state. However, these structures are for the apoprotein, or opsin, form that does not contain the agonist all-trans retinal. Here we present a crystal structure at a resolution of 3 Å for the constitutively active rhodopsin mutant Glu 113 Gln in complex with a peptide derived from the carboxy terminus of the α-subunit of the G protein transducin. The protein is in an active conformation that retains retinal in the binding pocket after photoactivation. Comparison with the structure of ground-state rhodopsin suggests how translocation of the retinal β-ionone ring leads to a rotation of transmembrane helix 6, which is the critical conformational change on activation. A key feature of this conformational change is a reorganization of water-mediated hydrogen-bond networks between the retinal-binding pocket and three of the most conserved GPCR sequence motifs. We thus show how an agonist ligand can activate its GPCR.

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Mendeley demographics

Mendeley demographics

The data shown below were compiled from readership statistics for 399 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Geographical breakdown
Country Count As %
United States 7 2%
United Kingdom 5 1%
Spain 3 <1%
Germany 3 <1%
France 2 <1%
China 2 <1%
Canada 2 <1%
Singapore 1 <1%
Russia 1 <1%
Other 3 <1%
Unknown 370 93%

Demographic breakdown

Readers by professional status
Readers by professional status Count As %
Student > Ph. D. Student 102 26%
Researcher 90 23%
Student > Master 43 11%
Student > Bachelor 26 7%
Student > Doctoral Student 21 5%
Other 68 17%
Unknown 49 12%
Readers by discipline
Readers by discipline Count As %
Agricultural and Biological Sciences 162 41%
Biochemistry, Genetics and Molecular Biology 73 18%
Chemistry 44 11%
Medicine and Dentistry 13 3%
Neuroscience 11 3%
Other 43 11%
Unknown 53 13%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 20. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 25 April 2026.
All research outputs
#2,051,579
of 28,476,975 outputs
Outputs from Nature
#45,335
of 105,263 outputs
Outputs of similar age
#8,137
of 128,081 outputs
Outputs of similar age from Nature
#242
of 714 outputs
Altmetric has tracked 28,476,975 research outputs across all sources so far. Compared to these this one has done particularly well and is in the 92nd percentile: it's in the top 10% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 105,263 research outputs from this source. They typically receive a lot more attention than average, with a mean Attention Score of 100.6. This one has gotten more attention than average, scoring higher than 56% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 128,081 tracked outputs that were published within six weeks on either side of this one in any source. This one has done particularly well, scoring higher than 93% of its contemporaries.
We're also able to compare this research output to 714 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 65% of its contemporaries.