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Selecting among three basic fitness landscape models: Additive, multiplicative and stickbreaking

Overview of attention for article published in Theoretical Population Biology, December 2017
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Article details
Title
Selecting among three basic fitness landscape models: Additive, multiplicative and stickbreaking
Published in
Theoretical Population Biology, December 2017
DOI 10.1016/j.tpb.2017.10.006
Pubmed ID
Authors
Abstract

Fitness landscapes map genotypes to organismal fitness. Their topographies depend on how mutational effects interact-epistasis-and are important for understanding evolutionary processes such as speciation, the rate of adaptation, the advantage of recombination, and the predictability versus stochasticity of evolution. The growing amount of data has made it possible to better test landscape models empirically. We argue that this endeavor will benefit from the development and use of meaningful basic models against which to compare more complex models. Here we develop statistical and computational methods for fitting fitness data from mutation combinatorial networks to three simple models: additive, multiplicative and stickbreaking. We employ a Bayesian framework for doing model selection. Using simulations, we demonstrate that our methods work and we explore their statistical performance: bias, error, and the power to discriminate among models. We then illustrate our approach and its flexibility by analyzing several previously published datasets. An R-package that implements our methods is available in the CRAN repository under the name Stickbreaker.

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X Demographics

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Mendeley demographics

Mendeley demographics

The data shown below were compiled from readership statistics for 41 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Geographical breakdown
Country Count As %
Unknown 41 100%

Demographic breakdown

Readers by professional status
Readers by professional status Count As %
Researcher 8 20%
Student > Ph. D. Student 7 17%
Student > Master 3 7%
Other 2 5%
Student > Doctoral Student 2 5%
Other 5 12%
Unknown 14 34%
Readers by discipline
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 10 24%
Agricultural and Biological Sciences 6 15%
Computer Science 2 5%
Environmental Science 1 2%
Physics and Astronomy 1 2%
Other 3 7%
Unknown 18 44%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 23 May 2018.
All research outputs
#22,764,772
of 25,382,440 outputs
Outputs from Theoretical Population Biology
#625
of 665 outputs
Outputs of similar age
#384,414
of 444,857 outputs
Outputs of similar age from Theoretical Population Biology
#13
of 13 outputs
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So far Altmetric has tracked 665 research outputs from this source. They receive a mean Attention Score of 4.7. This one is in the 1st percentile – i.e., 1% of its peers scored the same or lower than it.
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