↓ Skip to main content

Identification of Host Cell Factors Associated with Astrovirus Replication in Caco-2 Cells

Overview of attention for article published in Journal of Virology, August 2015
Altmetric Badge

About this Attention Score

  • Good Attention Score compared to outputs of the same age (67th percentile)
  • Above-average Attention Score compared to outputs of the same age and source (56th percentile)

Mentioned by

twitter
1 X user
wikipedia
5 Wikipedia pages

Readers on

mendeley
80 Mendeley
You are seeing a free-to-access but limited selection of the activity Altmetric has collected about this research output. Click here to find out more.
Article details
Title
Identification of Host Cell Factors Associated with Astrovirus Replication in Caco-2 Cells
Published in
Journal of Virology, August 2015
DOI 10.1128/jvi.01225-15
Pubmed ID
Authors
Abstract

Astroviruses are small, non-enveloped viruses with a single-stranded positive-sense RNA genome, causing acute gastroenteritis in children and immunocompromised patients. Since positive-sense RNA viruses have been frequently found to replicate associated to membranous structures, in this work we characterized the replication of the human astroviruses serotype 8 strain Yuc8 in Caco-2 cells, using density gradient centrifugation and free flow zonal electrophoresis (FFZE) to fractionate cellular membranes. Structural and nonstructural viral proteins, positive- and negative-sense viral RNA, and infectious virus particles, were found to be associated with a distinct population of membranes separated by FFZE. The cellular proteins associated with this membrane population in infected and mock-infected cells, were identified by tandem mass spectrometry. Results indicated that membranes derived from multiple cell organelles were present in the population. Gene ontology and protein-protein interaction network analysis showed that groups of proteins with roles in fatty acid synthesis and ATP biosynthesis were highly enriched in the fractions of this population in infected cells. Based on this information, we investigated by RNA interference the role that some of the identified proteins might have in the replication cycle of the virus. Silencing the expression of genes involved in cholesterol (DHCR7, CYP51A1) and fatty acid (FASN) synthesis, phosphatidylinositol (PI4KIII-β) and inositol-phosphate (ITPR3) metabolism, and RNA helicase activity (DDX23), significantly decreased amounts of Yuc8 genomic and antigenomic RNA, synthesis of the structural protein VP90, and virus yield. These results strongly suggest that astrovirus RNA replication and particle assembly take place in association with modified membranes potentially derived from multiple cell organelles. Astroviruses are common etiological agents of acute gastroenteritis in children and immunocompromised patients. More recently, they have been associated with neurological diseases in mammals, including humans, and are also responsible for different pathologies in birds. In this work we provide evidence that astrovirus RNA replication and virus assembly occurs in contact with cell membranes potentially derived from multiple cell organelles and show that cellular proteins involved in lipid metabolism that associate with these membranes are required for the efficient viral replication. Our findings provide information to the knowledge of astrovirus biology and provide information that might be useful to develop therapeutic interventions to prevent virus replication.

Login to access the Attention Digest and the Sentiment Analysis related to this output.

Timeline Attention over time Attention Score history
Login to access the full charts related to this output.
X Demographics

X Demographics

The data shown below were collected from the profile of 1 X user who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 80 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Geographical breakdown
Country Count As %
Unknown 80 100%

Demographic breakdown

Readers by professional status
Readers by professional status Count As %
Student > Ph. D. Student 14 18%
Student > Bachelor 10 13%
Student > Master 10 13%
Researcher 9 11%
Student > Doctoral Student 4 5%
Other 9 11%
Unknown 24 30%
Readers by discipline
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 19 24%
Agricultural and Biological Sciences 19 24%
Veterinary Science and Veterinary Medicine 4 5%
Immunology and Microbiology 4 5%
Medicine and Dentistry 4 5%
Other 7 9%
Unknown 23 29%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 4. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 21 March 2025.
All research outputs
#7,960,052
of 25,374,647 outputs
Outputs from Journal of Virology
#10,485
of 25,689 outputs
Outputs of similar age
#85,807
of 275,662 outputs
Outputs of similar age from Journal of Virology
#96
of 229 outputs
Altmetric has tracked 25,374,647 research outputs across all sources so far. This one has received more attention than most of these and is in the 67th percentile.
So far Altmetric has tracked 25,689 research outputs from this source. They typically receive a little more attention than average, with a mean Attention Score of 7.5. This one has gotten more attention than average, scoring higher than 57% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 275,662 tracked outputs that were published within six weeks on either side of this one in any source. This one has gotten more attention than average, scoring higher than 67% of its contemporaries.
We're also able to compare this research output to 229 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 56% of its contemporaries.