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Single-cell RNA-seq uncovers dynamic processes and critical regulators in mouse spermatogenesis

Overview of attention for article published in Cell Research, July 2018
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About this Attention Score

  • In the top 25% of all research outputs scored by Altmetric
  • High Attention Score compared to outputs of the same age (90th percentile)
  • High Attention Score compared to outputs of the same age and source (86th percentile)

Mentioned by

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1 news outlet
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13 X users
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1 patent
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Readers on

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285 Mendeley
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Article details
Title
Single-cell RNA-seq uncovers dynamic processes and critical regulators in mouse spermatogenesis
Published in
Cell Research, July 2018
DOI 10.1038/s41422-018-0074-y
Pubmed ID
Authors
Abstract

A systematic interrogation of male germ cells is key to complete understanding of molecular mechanisms governing spermatogenesis and the development of new strategies for infertility therapies and male contraception. Here we develop an approach to purify all types of homogeneous spermatogenic cells by combining transgenic labeling and synchronization of the cycle of the seminiferous epithelium, and subsequent single-cell RNA-sequencing. We reveal extensive and previously uncharacterized dynamic processes and molecular signatures in gene expression, as well as specific patterns of alternative splicing, and novel regulators for specific stages of male germ cell development. Our transcriptomics analyses led us to discover discriminative markers for isolating round spermatids at specific stages, and different embryo developmental potentials between early and late stage spermatids, providing evidence that maturation of round spermatids impacts on embryo development. This work provides valuable insights into mammalian spermatogenesis, and a comprehensive resource for future studies towards the complete elucidation of gametogenesis.

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X Demographics

X Demographics

The data shown below were collected from the profiles of 13 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley demographics

Mendeley demographics

The data shown below were compiled from readership statistics for 285 Mendeley readers of this research output. Click here to see the associated Mendeley record.
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Geographical breakdown

Geographical breakdown
Country Count As %
Unknown 285 100%

Demographic breakdown

Readers by professional status
Readers by professional status Count As %
Student > Ph. D. Student 58 20%
Researcher 48 17%
Student > Master 21 7%
Student > Bachelor 18 6%
Other 12 4%
Other 26 9%
Unknown 102 36%
Readers by discipline
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 88 31%
Agricultural and Biological Sciences 42 15%
Medicine and Dentistry 19 7%
Pharmacology, Toxicology and Pharmaceutical Science 3 1%
Computer Science 3 1%
Other 20 7%
Unknown 110 39%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 21. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 29 November 2019.
All research outputs
#2,255,698
of 33,351,181 outputs
Outputs from Cell Research
#351
of 2,406 outputs
Outputs of similar age
#35,001
of 363,389 outputs
Outputs of similar age from Cell Research
#3
of 22 outputs
Altmetric has tracked 33,351,181 research outputs across all sources so far. Compared to these this one has done particularly well and is in the 93rd percentile: it's in the top 10% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 2,406 research outputs from this source. They typically receive a lot more attention than average, with a mean Attention Score of 19.6. This one has done well, scoring higher than 85% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 363,389 tracked outputs that were published within six weeks on either side of this one in any source. This one has done particularly well, scoring higher than 90% of its contemporaries.
We're also able to compare this research output to 22 others from the same source and published within six weeks on either side of this one. This one has done well, scoring higher than 86% of its contemporaries.