↓ Skip to main content

Conserved piRNA Expression from a Distinct Set of piRNA Cluster Loci in Eutherian Mammals

Overview of attention for article published in PLoS Genetics, November 2015
Altmetric Badge

About this Attention Score

  • In the top 25% of all research outputs scored by Altmetric
  • High Attention Score compared to outputs of the same age (94th percentile)
  • High Attention Score compared to outputs of the same age and source (85th percentile)

Mentioned by

blogs
2 blogs
twitter
17 X users
patent
1 patent
facebook
1 Facebook page

Readers on

mendeley
107 Mendeley
You are seeing a free-to-access but limited selection of the activity Altmetric has collected about this research output. Click here to find out more.
Article details
Title
Conserved piRNA Expression from a Distinct Set of piRNA Cluster Loci in Eutherian Mammals
Published in
PLoS Genetics, November 2015
DOI 10.1371/journal.pgen.1005652
Pubmed ID
Authors
Abstract

The Piwi pathway is deeply conserved amongst animals because one of its essential functions is to repress transposons. However, many Piwi-interacting RNAs (piRNAs) do not base-pair to transposons and remain mysterious in their targeting function. The sheer number of piRNA cluster (piC) loci in animal genomes and infrequent piRNA sequence conservation also present challenges in determining which piC loci are most important for development. To address this question, we determined the piRNA expression patterns of piC loci across a wide phylogenetic spectrum of animals, and reveal that most genic and intergenic piC loci evolve rapidly in their capacity to generate piRNAs, regardless of known transposon silencing function. Surprisingly, we also uncovered a distinct set of piC loci with piRNA expression conserved deeply in Eutherian mammals. We name these loci Eutherian-Conserved piRNA cluster (ECpiC) loci. Supporting the hypothesis that conservation of piRNA expression across ~100 million years of Eutherian evolution implies function, we determined that one ECpiC locus generates abundant piRNAs antisense to the STOX1 transcript, a gene clinically associated with preeclampsia. Furthermore, we confirmed reduced piRNAs in existing mouse mutations at ECpiC-Asb1 and -Cbl, which also display spermatogenic defects. The Asb1 mutant testes with strongly reduced Asb1 piRNAs also exhibit up-regulated gene expression profiles. These data indicate ECpiC loci may be specially adapted to support Eutherian reproduction.

Login to access the Attention Digest and the Sentiment Analysis related to this output.

Timeline Attention over time Attention Score history
Login to access the full charts related to this output.
Activity
Login to access the full charts related to this output.
X Demographics

X Demographics

The data shown below were collected from the profiles of 17 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley demographics

Mendeley demographics

The data shown below were compiled from readership statistics for 107 Mendeley readers of this research output. Click here to see the associated Mendeley record.
Login to view Mendeley reader trends over time.

Geographical breakdown

Geographical breakdown
Country Count As %
United Kingdom 2 2%
United States 1 <1%
France 1 <1%
Germany 1 <1%
Unknown 102 95%

Demographic breakdown

Readers by professional status
Readers by professional status Count As %
Researcher 22 21%
Student > Ph. D. Student 19 18%
Student > Master 9 8%
Student > Postgraduate 8 7%
Student > Doctoral Student 7 7%
Other 19 18%
Unknown 23 21%
Readers by discipline
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 34 32%
Agricultural and Biological Sciences 29 27%
Medicine and Dentistry 5 5%
Computer Science 4 4%
Pharmacology, Toxicology and Pharmaceutical Science 2 2%
Other 7 7%
Unknown 26 24%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 26. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 25 September 2020.
All research outputs
#1,905,240
of 34,362,729 outputs
Outputs from PLoS Genetics
#1,128
of 9,870 outputs
Outputs of similar age
#24,308
of 440,228 outputs
Outputs of similar age from PLoS Genetics
#32
of 219 outputs
Altmetric has tracked 34,362,729 research outputs across all sources so far. Compared to these this one has done particularly well and is in the 94th percentile: it's in the top 10% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 9,870 research outputs from this source. They typically receive a lot more attention than average, with a mean Attention Score of 16.9. This one has done well, scoring higher than 88% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 440,228 tracked outputs that were published within six weeks on either side of this one in any source. This one has done particularly well, scoring higher than 94% of its contemporaries.
We're also able to compare this research output to 219 others from the same source and published within six weeks on either side of this one. This one has done well, scoring higher than 85% of its contemporaries.