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A Computational Model of the Rainbow Trout Hypothalamus-Pituitary-Ovary-Liver Axis

Overview of attention for article published in PLoS Computational Biology, April 2016
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Article details
Title
A Computational Model of the Rainbow Trout Hypothalamus-Pituitary-Ovary-Liver Axis
Published in
PLoS Computational Biology, April 2016
DOI 10.1371/journal.pcbi.1004874
Pubmed ID
Authors
Abstract

Reproduction in fishes and other vertebrates represents the timely coordination of many endocrine factors that culminate in the production of mature, viable gametes. In recent years there has been rapid growth in understanding fish reproductive biology, which has been motivated in part by recognition of the potential effects that climate change, habitat destruction and contaminant exposure can have on natural and cultured fish populations. New approaches to understanding the impacts of these stressors are being developed that require a systems biology approach with more biologically accurate and detailed mathematical models. We have developed a multi-scale mathematical model of the female rainbow trout hypothalamus-pituitary-ovary-liver axis to use as a tool to help understand the functioning of the system and for extrapolation of laboratory findings of stressor impacts on specific components of the axis. The model describes the essential endocrine components of the female rainbow trout reproductive axis. The model also describes the stage specific growth of maturing oocytes within the ovary and permits the presence of sub-populations of oocytes at different stages of development. Model formulation and parametrization was largely based on previously published in vivo and in vitro data in rainbow trout and new data on the synthesis of gonadotropins in the pituitary. Model predictions were validated against several previously published data sets for annual changes in gonadotropins and estradiol in rainbow trout. Estimates of select model parameters can be obtained from in vitro assays using either quantitative (direct estimation of rate constants) or qualitative (relative change from control values) approaches. This is an important aspect of mathematical models as in vitro, cell-based assays are expected to provide the bulk of experimental data for future risk assessments and will require quantitative physiological models to extrapolate across biological scales.

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The data shown below were compiled from readership statistics for 30 Mendeley readers of this research output. Click here to see the associated Mendeley record.
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Geographical breakdown

Geographical breakdown
Country Count As %
Unknown 30 100%

Demographic breakdown

Readers by professional status
Readers by professional status Count As %
Student > Ph. D. Student 7 23%
Student > Master 6 20%
Researcher 4 13%
Other 2 7%
Professor 2 7%
Other 2 7%
Unknown 7 23%
Readers by discipline
Readers by discipline Count As %
Agricultural and Biological Sciences 6 20%
Environmental Science 5 17%
Biochemistry, Genetics and Molecular Biology 5 17%
Medicine and Dentistry 3 10%
Veterinary Science and Veterinary Medicine 1 3%
Other 3 10%
Unknown 7 23%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 21 April 2016.
All research outputs
#28,754,119
of 34,526,284 outputs
Outputs from PLoS Computational Biology
#9,447
of 10,433 outputs
Outputs of similar age
#264,622
of 338,937 outputs
Outputs of similar age from PLoS Computational Biology
#145
of 159 outputs
Altmetric has tracked 34,526,284 research outputs across all sources so far. This one is in the 9th percentile – i.e., 9% of other outputs scored the same or lower than it.
So far Altmetric has tracked 10,433 research outputs from this source. They typically receive a lot more attention than average, with a mean Attention Score of 17.8. This one is in the 4th percentile – i.e., 4% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 338,937 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 11th percentile – i.e., 11% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 159 others from the same source and published within six weeks on either side of this one. This one is in the 5th percentile – i.e., 5% of its contemporaries scored the same or lower than it.