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Zebrafish

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Cover of 'Zebrafish'

Table of Contents

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    Book Overview
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    Chapter 1 Chemical Screening in Zebrafish
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    Chapter 2 TALEN-Mediated Mutagenesis and Genome Editing
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    Chapter 3 Zebrafish
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    Chapter 4 Detection of Multiple Genome Modifications Induced by the CRISPR/Cas9 System
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    Chapter 5 Generation of Targeted Genomic Deletions Through CRISPR/Cas System in Zebrafish
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    Chapter 6 Testing of Cis -Regulatory Elements by Targeted Transgene Integration in Zebrafish Using PhiC31 Integrase
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    Chapter 7 Zebrafish
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    Chapter 8 Construction of the Inbred Strain
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    Chapter 9 Zebrafish as a Model for the Study of Solid Malignancies
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    Chapter 10 Melanoma Regression and Recurrence in Zebrafish
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    Chapter 11 Imaging of Human Cancer Cell Proliferation, Invasion, and Micrometastasis in a Zebrafish Xenogeneic Engraftment Model
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    Chapter 12 Modeling Leukemogenesis in the Zebrafish Using Genetic and Xenograft Models
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    Chapter 13 Zebrafish
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    Chapter 14 Zebrafish
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    Chapter 15 Zebrafish
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    Chapter 16 Studying Lipid Metabolism and Transport During Zebrafish Development
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    Chapter 17 Targeted Electroporation in Embryonic, Larval, and Adult Zebrafish
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    Chapter 18 Studying Axonal Regeneration by Laser Microsurgery and High-Resolution Videomicroscopy
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    Chapter 19 Zebrafish
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    Chapter 20 Quantifying Aggressive Behavior in Zebrafish
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    Chapter 21 Correlating Whole Brain Neural Activity with Behavior in Head-Fixed Larval Zebrafish
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    Chapter 22 A Practical Guide to Light Sheet Microscopy
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    Chapter 23 Calcium Imaging of Neuronal Activity in Free-Swimming Larval Zebrafish
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    Chapter 24 Fiber Optic-Based Photostimulation of Larval Zebrafish
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    Chapter 25 Genetic Ablation, Sensitization, and Isolation of Neurons Using Nitroreductase and Tetrodotoxin-Insensitive Channels
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    Chapter 26 Erratum
Attention for Chapter 2: TALEN-Mediated Mutagenesis and Genome Editing
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Chapter title
TALEN-Mediated Mutagenesis and Genome Editing
Chapter number 2
Book title
Zebrafish
Published in
Methods in molecular biology, January 2016
DOI 10.1007/978-1-4939-3771-4_2
Pubmed ID
Book ISBNs
978-1-4939-3769-1, 978-1-4939-3771-4
Authors

Alvin C. H. Ma, Yi Chen, Patrick R. Blackburn, Stephen C. Ekker, Ma, Alvin C. H., Chen, Yi, Blackburn, Patrick R., Ekker, Stephen C.

Abstract

Transcription activator-like effectors (TALEs) are important genomic tools with customizable DNA-binding motifs for locus-specific modifications. In particular, TALE nucleases or TALENs have been successfully used in the zebrafish model system to introduce targeted mutations via repair of double-stranded breaks (DSBs) either through nonhomologous end joining (NHEJ) or by homology-directed repair (HDR) and homology-independent repair in the presence of a donor template. Compared with other customizable nucleases, TALENs offer high binding specificity and fewer sequence constraints in targeting the genome, with comparable mutagenic activity. Here, we describe a detailed in silico design tool for zebrafish genome editing for TALENs and CRISPR/Cas9 custom restriction enzymes using Mojo Hand 2.0 software.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 32 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 32 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 6 19%
Student > Bachelor 4 13%
Student > Ph. D. Student 4 13%
Student > Doctoral Student 3 9%
Professor > Associate Professor 2 6%
Other 3 9%
Unknown 10 31%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 11 34%
Agricultural and Biological Sciences 3 9%
Neuroscience 3 9%
Immunology and Microbiology 2 6%
Psychology 1 3%
Other 3 9%
Unknown 9 28%