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The complete genome sequence of the rumen methanogen Methanobrevibacter millerae SM9

Overview of attention for article published in Environmental Microbiome, August 2016
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  • Above-average Attention Score compared to outputs of the same age and source (62nd percentile)

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Title
The complete genome sequence of the rumen methanogen Methanobrevibacter millerae SM9
Published in
Environmental Microbiome, August 2016
DOI 10.1186/s40793-016-0171-9
Pubmed ID
Authors

William J. Kelly, Diana M. Pacheco, Dong Li, Graeme T. Attwood, Eric Altermann, Sinead C. Leahy

Abstract

Methanobrevibacter millerae SM9 was isolated from the rumen of a sheep maintained on a fresh forage diet, and its genome has been sequenced to provide information on the phylogenetic diversity of rumen methanogens with a view to developing technologies for methane mitigation. It is the first rumen isolate from the Methanobrevibacter gottschalkii clade to have its genome sequence completed. The 2.54 Mb SM9 chromosome has an average G + C content of 31.8 %, encodes 2269 protein-coding genes, and harbors a single prophage. The overall gene content is comparable to that of Methanobrevibacter ruminantium M1 and the type strain of M. millerae (ZA-10(T)) suggesting that the basic metabolism of these two hydrogenotrophic rumen methanogen species is similar. However, M. millerae has a larger complement of genes involved in methanogenesis including genes for methyl coenzyme M reductase II (mrtAGDB) which are not found in M1. Unusual features of the M. millerae genomes include the presence of a tannase gene which shows high sequence similarity with the tannase from Lactobacillus plantarum, and large non-ribosomal peptide synthase genes. The M. millerae sequences indicate that methane mitigation strategies based on the M. ruminantium M1 genome sequence are also likely to be applicable to members of the M. gottschalkii clade.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 39 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 39 100%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 9 23%
Student > Master 7 18%
Researcher 5 13%
Student > Doctoral Student 3 8%
Student > Bachelor 2 5%
Other 3 8%
Unknown 10 26%
Readers by discipline Count As %
Agricultural and Biological Sciences 16 41%
Biochemistry, Genetics and Molecular Biology 6 15%
Immunology and Microbiology 2 5%
Environmental Science 1 3%
Computer Science 1 3%
Other 3 8%
Unknown 10 26%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 4. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 22 August 2016.
All research outputs
#7,356,343
of 25,374,647 outputs
Outputs from Environmental Microbiome
#205
of 786 outputs
Outputs of similar age
#108,402
of 354,260 outputs
Outputs of similar age from Environmental Microbiome
#8
of 24 outputs
Altmetric has tracked 25,374,647 research outputs across all sources so far. This one has received more attention than most of these and is in the 69th percentile.
So far Altmetric has tracked 786 research outputs from this source. They receive a mean Attention Score of 4.8. This one has gotten more attention than average, scoring higher than 72% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 354,260 tracked outputs that were published within six weeks on either side of this one in any source. This one has gotten more attention than average, scoring higher than 68% of its contemporaries.
We're also able to compare this research output to 24 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 62% of its contemporaries.