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Predicting PDZ domain mediated protein interactions from structure

Overview of attention for article published in BMC Bioinformatics, January 2013
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About this Attention Score

  • Good Attention Score compared to outputs of the same age (71st percentile)
  • Above-average Attention Score compared to outputs of the same age and source (57th percentile)

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6 X users

Citations

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32 Dimensions

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76 Mendeley
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2 CiteULike
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Title
Predicting PDZ domain mediated protein interactions from structure
Published in
BMC Bioinformatics, January 2013
DOI 10.1186/1471-2105-14-27
Pubmed ID
Authors

Shirley Hui, Xiang Xing, Gary D Bader

Abstract

PDZ domains are structural protein domains that recognize simple linear amino acid motifs, often at protein C-termini, and mediate protein-protein interactions (PPIs) in important biological processes, such as ion channel regulation, cell polarity and neural development. PDZ domain-peptide interaction predictors have been developed based on domain and peptide sequence information. Since domain structure is known to influence binding specificity, we hypothesized that structural information could be used to predict new interactions compared to sequence-based predictors.

X Demographics

X Demographics

The data shown below were collected from the profiles of 6 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 76 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Israel 1 1%
India 1 1%
Canada 1 1%
Spain 1 1%
Japan 1 1%
Unknown 71 93%

Demographic breakdown

Readers by professional status Count As %
Researcher 20 26%
Student > Ph. D. Student 18 24%
Student > Bachelor 11 14%
Professor > Associate Professor 6 8%
Student > Master 6 8%
Other 11 14%
Unknown 4 5%
Readers by discipline Count As %
Agricultural and Biological Sciences 30 39%
Biochemistry, Genetics and Molecular Biology 22 29%
Medicine and Dentistry 5 7%
Computer Science 4 5%
Engineering 4 5%
Other 8 11%
Unknown 3 4%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 4. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 28 September 2017.
All research outputs
#7,345,736
of 23,881,329 outputs
Outputs from BMC Bioinformatics
#2,761
of 7,454 outputs
Outputs of similar age
#78,549
of 284,347 outputs
Outputs of similar age from BMC Bioinformatics
#59
of 144 outputs
Altmetric has tracked 23,881,329 research outputs across all sources so far. This one has received more attention than most of these and is in the 68th percentile.
So far Altmetric has tracked 7,454 research outputs from this source. They typically receive a little more attention than average, with a mean Attention Score of 5.5. This one has gotten more attention than average, scoring higher than 61% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 284,347 tracked outputs that were published within six weeks on either side of this one in any source. This one has gotten more attention than average, scoring higher than 71% of its contemporaries.
We're also able to compare this research output to 144 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 57% of its contemporaries.