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High-Throughput Glycomics and Glycoproteomics

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Cover of 'High-Throughput Glycomics and Glycoproteomics'

Table of Contents

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    Book Overview
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    Chapter 1 Ubiquitous Importance of Protein Glycosylation.
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    Chapter 2 Laboratory Experimental Design for a Glycomic Study.
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    Chapter 3 High-Throughput Analysis of the IgG N-Glycome by UPLC-FLR.
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    Chapter 4 High-Throughput Analysis of IgG Fc Glycopeptides by LC-MS.
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    Chapter 5 Sialic Acid Derivatization for the Rapid Subclass- and Sialic Acid Linkage-Specific MALDI-TOF-MS Analysis of IgG Fc-Glycopeptides.
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    Chapter 6 The Use of Multiple Reaction Monitoring on QQQ-MS for the Analysis of Protein- and Site-Specific Glycosylation Patterns in Serum.
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    Chapter 7 Analysis of Permethylated Glycan by Liquid Chromatography (LC) and Mass Spectrometry (MS).
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    Chapter 8 High-Throughput Analysis of the Plasma N-Glycome by UHPLC.
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    Chapter 9 Site-Specific N- and O-Glycopeptide Analysis Using an Integrated C18-PGC-LC-ESI-QTOF-MS/MS Approach.
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    Chapter 10 Analysis of Milk Oligosaccharides by Mass Spectrometry.
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    Chapter 11 N- and O-Glycomics from Minor Amounts of Formalin-Fixed, Paraffin-Embedded Tissue Samples.
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    Chapter 12 Carbohydrate Microarray Technology Applied to High-Throughput Mapping of Plant Cell Wall Glycans Using Comprehensive Microarray Polymer Profiling (CoMPP).
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    Chapter 13 Analysis of Invertebrate and Protist N-Glycans.
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    Chapter 14 High-Throughput and High-Sensitivity Mass Spectrometry-Based N-Glycomics of Mammalian Cells.
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    Chapter 15 Analysis of N-Glycosylation of Total Membrane Proteins.
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    Chapter 16 HILIC-UPLC Analysis of Brain Tissue N-Glycans.
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    Chapter 17 Automated Integration of a UPLC Glycomic Profile.
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    Chapter 18 Databases and Associated Tools for Glycomics and Glycoproteomics.
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    Chapter 19 High-Throughput N-Glycan Analysis with Rapid Magnetic Bead-Based Sample Preparation.
Attention for Chapter 14: High-Throughput and High-Sensitivity Mass Spectrometry-Based N-Glycomics of Mammalian Cells.
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Chapter title
High-Throughput and High-Sensitivity Mass Spectrometry-Based N-Glycomics of Mammalian Cells.
Chapter number 14
Book title
High-Throughput Glycomics and Glycoproteomics
Published in
Methods in molecular biology, January 2017
DOI 10.1007/978-1-4939-6493-2_14
Pubmed ID
Book ISBNs
978-1-4939-6491-8, 978-1-4939-6493-2
Authors

Stephanie Holst, Gabi W. van Pelt, Wilma E. Mesker, Rob A. Tollenaar, Ana I. Belo, Irma van Die, Yoann Rombouts, Manfred Wuhrer

Editors

Gordan Lauc, Manfred Wuhrer

Abstract

The current protocols for glycomic analysis of cells often require a large quantity of material (5-20 million cells). In order to analyze the N-glycosylation from small amounts of cells (≤1 million) as obtained from, for example, primary cell lines or cell sorting, and in a higher throughput approach, we set up a robust 96-well format PVDF-membrane based N-glycan release protocol followed by linkage-specific sialic acid stabilization, cleanup, and MALDI-TOF-MS analysis. We further evaluated the influence of PNGase F incubation time on the N-glycan profile.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 4 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 4 100%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 1 25%
Lecturer 1 25%
Other 1 25%
Student > Doctoral Student 1 25%
Readers by discipline Count As %
Agricultural and Biological Sciences 2 50%
Biochemistry, Genetics and Molecular Biology 1 25%
Veterinary Science and Veterinary Medicine 1 25%