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Whole human genome proteogenomic mapping for ENCODE cell line data: identifying protein-coding regions

Overview of attention for article published in BMC Genomics, February 2013
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About this Attention Score

  • In the top 25% of all research outputs scored by Altmetric
  • High Attention Score compared to outputs of the same age (90th percentile)
  • High Attention Score compared to outputs of the same age and source (93rd percentile)

Mentioned by

twitter
18 X users
wikipedia
1 Wikipedia page

Citations

dimensions_citation
53 Dimensions

Readers on

mendeley
74 Mendeley
citeulike
5 CiteULike
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Title
Whole human genome proteogenomic mapping for ENCODE cell line data: identifying protein-coding regions
Published in
BMC Genomics, February 2013
DOI 10.1186/1471-2164-14-141
Pubmed ID
Authors

Jainab Khatun, Yanbao Yu, John A Wrobel, Brian A Risk, Harsha P Gunawardena, Ashley Secrest, Wendy J Spitzer, Ling Xie, Li Wang, Xian Chen, Morgan C Giddings

Abstract

Proteogenomic mapping is an approach that uses mass spectrometry data from proteins to directly map protein-coding genes and could aid in locating translational regions in the human genome. In concert with the ENcyclopedia of DNA Elements (ENCODE) project, we applied proteogenomic mapping to produce proteogenomic tracks for the UCSC Genome Browser, to explore which putative translational regions may be missing from the human genome.

X Demographics

X Demographics

The data shown below were collected from the profiles of 18 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 74 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
France 2 3%
United States 1 1%
Turkey 1 1%
Brazil 1 1%
Unknown 69 93%

Demographic breakdown

Readers by professional status Count As %
Researcher 24 32%
Student > Ph. D. Student 16 22%
Student > Master 9 12%
Professor > Associate Professor 4 5%
Student > Bachelor 3 4%
Other 11 15%
Unknown 7 9%
Readers by discipline Count As %
Agricultural and Biological Sciences 27 36%
Biochemistry, Genetics and Molecular Biology 23 31%
Medicine and Dentistry 6 8%
Chemistry 4 5%
Immunology and Microbiology 2 3%
Other 4 5%
Unknown 8 11%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 14. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 18 November 2013.
All research outputs
#2,558,449
of 25,374,917 outputs
Outputs from BMC Genomics
#702
of 11,244 outputs
Outputs of similar age
#20,395
of 205,219 outputs
Outputs of similar age from BMC Genomics
#13
of 194 outputs
Altmetric has tracked 25,374,917 research outputs across all sources so far. Compared to these this one has done well and is in the 89th percentile: it's in the top 25% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 11,244 research outputs from this source. They receive a mean Attention Score of 4.8. This one has done particularly well, scoring higher than 93% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 205,219 tracked outputs that were published within six weeks on either side of this one in any source. This one has done particularly well, scoring higher than 90% of its contemporaries.
We're also able to compare this research output to 194 others from the same source and published within six weeks on either side of this one. This one has done particularly well, scoring higher than 93% of its contemporaries.