Title |
A mutant screening method by critical annealing temperature-PCR for site-directed mutagenesis
|
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Published in |
BMC Biotechnology, March 2013
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DOI | 10.1186/1472-6750-13-21 |
Pubmed ID | |
Authors |
Ying Liu, Ting Wu, Jian Song, Xuelian Chen, Yu Zhang, Yu Wan |
Abstract |
Distinguishing desired mutants from parental templates and undesired mutants is a problem not well solved in Quikchange™ mutagenesis. Although Dpn I digestion can eliminate methylated parental (WT) DNA, the efficiency is not satisfying due to the existence of hemi-methylated DNA in the PCR products, which is resistant to Dpn I. The present study designed a novel critical annealing temperature (T(c))-PCR to replace Dpn I digestion for more perfect mutant distinguishing, in which part-overlapping primers containing mutation(s) were used to reduce initial concentration of template DNA in mutagenic PCR. A T(c)-PCR with the same mutagenic primers was performed without Dpn I digestion. The T(c) for each pair of the primers was identified by gradient PCR. The relationship between PCR-identified T(c) and T(m) of the primers was analyzed and modeled with correlation and regression. |
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