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Data Integration in the Life Sciences

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Cover of 'Data Integration in the Life Sciences'

Table of Contents

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    Book Overview
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    Chapter 1 Ontologies and Data Integration in Biomedicine: Success Stories and Challenging Issues
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    Chapter 2 BioWarehouse: Relational Integration of Eleven Bioinformatics Databases and Formats
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    Chapter 3 Data Integration in the Life Sciences: Fun, Findings and Frustrations
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    Chapter 4 Analyzing the Evolution of Life Science Ontologies and Mappings
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    Chapter 5 Ontology Design Principles and Normalization Techniques in the Web
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    Chapter 6 Exploiting Ontology Structure and Patterns of Annotation to Mine Significant Associations between Pairs of Controlled Vocabulary Terms
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    Chapter 7 Automatic Methods for Integrating Biomedical Data Sources in a Mediator-Based System
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    Chapter 8 VisGenome and Ensembl: Usability of Integrated Genome Maps
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    Chapter 9 An Entity Resolution Framework for Deduplicating Proteins
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    Chapter 10 Semantic Representation and Querying of caBIG Data Services
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    Chapter 11 SisGen: A CORBA–Based Data Management Program for DNA Sequencing Projects
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    Chapter 12 Bgee: Integrating and Comparing Heterogeneous Transcriptome Data Among Species
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    Chapter 13 ENFIN - An Integrative Structure for Systems Biology
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    Chapter 14 A System for Ontology-Based Annotation of Biomedical Data
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    Chapter 15 Bio2RDF : A Semantic Web Atlas of Post Genomic Knowledge about Human and Mouse
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    Chapter 16 OMIE: Ontology Mapping within an Interactive and Extensible Environment
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    Chapter 17 Chemical Knowledge for the Semantic Web
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    Chapter 18 Combining One-Class Classification Models Based on Diverse Biological Data for Prediction of Protein-Protein Interactions
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    Chapter 19 Semi Supervised Spectral Clustering for Regulatory Module Discovery
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    Chapter 20 UniProtKB/Swiss-Prot: New and Future Developments
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    Chapter 21 EBI Proteomics Services
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    Chapter 22 Bio-ontologies Tutorial
Attention for Chapter 12: Bgee: Integrating and Comparing Heterogeneous Transcriptome Data Among Species
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Chapter title
Bgee: Integrating and Comparing Heterogeneous Transcriptome Data Among Species
Chapter number 12
Book title
Data Integration in the Life Sciences
Published by
Springer Berlin Heidelberg, January 2008
DOI 10.1007/978-3-540-69828-9_12
Book ISBNs
978-3-54-069827-2, 978-3-54-069828-9

Frederic Bastian, Gilles Parmentier, Julien Roux, Sebastien Moretti, Vincent Laudet, Marc Robinson-Rechavi


Amos Bairoch, Sarah Cohen-Boulakia, Christine Froidevaux

Twitter Demographics

The data shown below were collected from the profiles of 2 tweeters who shared this research output. Click here to find out more about how the information was compiled.

Mendeley readers

The data shown below were compiled from readership statistics for 129 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 6 5%
Sweden 1 <1%
Malaysia 1 <1%
Switzerland 1 <1%
India 1 <1%
Spain 1 <1%
Portugal 1 <1%
Unknown 117 91%

Demographic breakdown

Readers by professional status Count As %
Researcher 33 26%
Student > Ph. D. Student 27 21%
Student > Master 23 18%
Student > Bachelor 15 12%
Professor > Associate Professor 7 5%
Other 13 10%
Unknown 11 9%
Readers by discipline Count As %
Agricultural and Biological Sciences 55 43%
Biochemistry, Genetics and Molecular Biology 35 27%
Computer Science 12 9%
Medicine and Dentistry 4 3%
Pharmacology, Toxicology and Pharmaceutical Science 2 2%
Other 5 4%
Unknown 16 12%