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Antibiotics

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Cover of 'Antibiotics'

Table of Contents

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    Book Overview
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    Chapter 1 Antibiotics: Precious Goods in Changing Times
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    Chapter 2 Mining Bacterial Genomes for Secondary Metabolite Gene Clusters
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    Chapter 3 Production of Antimicrobial Compounds by Fermentation
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    Chapter 4 Structure Elucidation of Antibiotics by NMR Spectroscopy
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    Chapter 5 Computer-Aided Drug Design Methods
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    Chapter 6 Cytotoxicity Assays as Predictors of the Safety and Efficacy of Antimicrobial Agents
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    Chapter 7 Application of a Bacillus subtilis Whole-Cell Biosensor (PliaI-lux) for the Identification of Cell Wall Active Antibacterial Compounds
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    Chapter 8 Determination of Bacterial Membrane Impairment by Antimicrobial Agents
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    Chapter 9 Mass-Sensitive Biosensor Systems to Determine the Membrane Interaction of Analytes
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    Chapter 10 Measurement of Cell Membrane Fluidity by Laurdan GP: Fluorescence Spectroscopy and Microscopy
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    Chapter 11 In Vitro Assays to Identify Antibiotics Targeting DNA Metabolism
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    Chapter 12 Fluorescence-Based Real-Time Activity Assays to Identify RNase P Inhibitors
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    Chapter 13 Reporter Gene-Based Screening for TPP Riboswitch Activators
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    Chapter 14 Cell-Based Fluorescent Screen to Identify Inhibitors of Bacterial Translation Initiation
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    Chapter 15 Bacterial Histidine Kinases: Overexpression, Purification, and Inhibitor Screen
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    Chapter 16 Expression Profiling of Antibiotic-Resistant Bacteria Obtained by Laboratory Evolution
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    Chapter 17 Sample Preparation for Mass-Spectrometry Based Absolute Protein Quantification in Antibiotic Stress Research
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    Chapter 18 Label-Free Quantitation of Ribosomal Proteins from Bacillus subtilis for Antibiotic Research
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    Chapter 19 Functional Metagenomics to Study Antibiotic Resistance
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    Chapter 20 Epidemiological Surveillance and Typing Methods to Track Antibiotic Resistant Strains Using High Throughput Sequencing
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    Chapter 21 Erratum
Attention for Chapter 17: Sample Preparation for Mass-Spectrometry Based Absolute Protein Quantification in Antibiotic Stress Research
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Chapter title
Sample Preparation for Mass-Spectrometry Based Absolute Protein Quantification in Antibiotic Stress Research
Chapter number 17
Book title
Antibiotics
Published in
Methods in molecular biology, January 2017
DOI 10.1007/978-1-4939-6634-9_17
Pubmed ID
Book ISBNs
978-1-4939-6632-5, 978-1-4939-6634-9
Authors

Florian Bonn, Sandra Maass, Dörte Becher

Editors

Peter Sass

Abstract

Absolute protein quantification is an essential tool for system biology approaches and elucidation of stoichiometry of multi-protein complexes. In this chapter, a universal protocol for gel free absolute protein quantification in bacterial systems is described, which can be used for sample preparation prior to miscellaneous mass-spectrometry-based quantification workflows like AQUA, Hi3, and emPAI. In addition, a focus has been set to the specific challenges in antibiotic stress research.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 6 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 6 100%

Demographic breakdown

Readers by professional status Count As %
Other 1 17%
Student > Bachelor 1 17%
Student > Master 1 17%
Researcher 1 17%
Professor > Associate Professor 1 17%
Other 0 0%
Unknown 1 17%
Readers by discipline Count As %
Computer Science 2 33%
Biochemistry, Genetics and Molecular Biology 1 17%
Agricultural and Biological Sciences 1 17%
Engineering 1 17%
Unknown 1 17%