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Chapter title |
QTL Mapping and Identification of Candidate Genes in DO Mice: A Use Case Model Derived from a Benzene Toxicity Experiment
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Chapter number | 12 |
Book title |
Systems Genetics
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Published in |
Methods in molecular biology, January 2017
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DOI | 10.1007/978-1-4939-6427-7_12 |
Pubmed ID | |
Book ISBNs |
978-1-4939-6425-3, 978-1-4939-6427-7
|
Authors |
Dan Gatti, John E. French, Klaus Schughart |
Editors |
Klaus Schughart, Robert W. Williams |
Abstract |
Diversity Outbred (DO) mice are a multiparental advanced generation intercross population derived from eight inbred strains which are genetically very diverse. They are maintained as an outbred population using a randomized mating design. Thus DO mice represent an ideal population to map phenotypic traits. Here, we provide a case study in which male DO mice were exposed to benzene and phenotyped for the number of micronucleated reticulocytes. We provide step-by-step R scripts for the analysis of phenotypes, genotypes, mapping of resistance gene loci and identification of candidate genes. |
Mendeley readers
The data shown below were compiled from readership statistics for 10 Mendeley readers of this research output. Click here to see the associated Mendeley record.
Geographical breakdown
Country | Count | As % |
---|---|---|
Unknown | 10 | 100% |
Demographic breakdown
Readers by professional status | Count | As % |
---|---|---|
Student > Ph. D. Student | 2 | 20% |
Professor | 1 | 10% |
Professor > Associate Professor | 1 | 10% |
Student > Bachelor | 1 | 10% |
Unknown | 5 | 50% |
Readers by discipline | Count | As % |
---|---|---|
Agricultural and Biological Sciences | 2 | 20% |
Biochemistry, Genetics and Molecular Biology | 2 | 20% |
Pharmacology, Toxicology and Pharmaceutical Science | 1 | 10% |
Unknown | 5 | 50% |