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Lipid signaling protocols

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Table of Contents

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    Book Overview
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    Chapter 1 Method for Assaying the Lipid Kinase Phosphatidylinositol-5-phosphate 4-kinase α in Quantitative High-Throughput Screening (qHTS) Bioluminescent Format
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    Chapter 2 Assaying Ceramide Synthase Activity In Vitro and in Living Cells Using Liquid Chromatography-Mass Spectrometry
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    Chapter 3 Lipid Signaling Protocols
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    Chapter 4 Identification of the Interactome of a Palmitoylated Membrane Protein, Phosphatidylinositol 4-Kinase Type II Alpha
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    Chapter 5 Measurement of Long-Chain Fatty Acyl-CoA Synthetase Activity
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    Chapter 6 Qualitative and Quantitative In Vitro Analysis of Phosphatidylinositol Phosphatase Substrate Specificity
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    Chapter 7 Luciferase Reporter Assays to Assess Liver X Receptor Transcriptional Activity
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    Chapter 8 Metabolically Biotinylated Reporters for Electron Microscopic Imaging of Cytoplasmic Membrane Microdomains
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    Chapter 9 Fluorescence Recovery After Photobleaching Analysis of the Diffusional Mobility of Plasma Membrane Proteins: HER3 Mobility in Breast Cancer Cell Membranes.
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    Chapter 10 Isolation and Analysis of Detergent-Resistant Membrane Fractions
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    Chapter 11 Detection of Isolated Mitochondria-Associated ER Membranes Using the Sigma-1 Receptor
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    Chapter 12 Using Surface Plasmon Resonance to Quantitatively Assess Lipid–Protein Interactions
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    Chapter 13 Analyzing Protein–Phosphoinositide Interactions with Liposome Flotation Assays
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    Chapter 14 High-Throughput Fluorometric Assay for Membrane–Protein Interaction
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    Chapter 15 Guidelines for the Use of Protein Domains in Acidic Phospholipid Imaging.
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    Chapter 16 Analysis of Sphingolipid Synthesis and Transport by Metabolic Labeling of Cultured Cells with [ 3 H]Serine
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    Chapter 17 Determination and Characterization of Tetraspanin-Associated Phosphoinositide-4 Kinases in Primary and Neoplastic Liver Cells
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    Chapter 18 Analysis of the Phosphoinositide Composition of Subcellular Membrane Fractions
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    Chapter 19 Single-Molecule Imaging of Signal Transduction via GPI-Anchored Receptors
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    Chapter 20 Measuring Phosphatidylinositol Generation on Biological Membranes
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    Chapter 21 Assay for CDP-Diacylglycerol Generation by CDS in Membrane Fractions
Attention for Chapter 18: Analysis of the Phosphoinositide Composition of Subcellular Membrane Fractions
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Chapter title
Analysis of the Phosphoinositide Composition of Subcellular Membrane Fractions
Chapter number 18
Book title
Lipid Signaling Protocols
Published in
Methods in molecular biology, January 2016
DOI 10.1007/978-1-4939-3170-5_18
Pubmed ID
Book ISBNs
978-1-4939-3169-9, 978-1-4939-3170-5
Authors

Deborah A. Sarkes, Lucia E. Rameh

Abstract

Phosphoinositides play critical roles in the transduction of extracellular signals through the plasma membrane and also in endomembrane events important for vesicle trafficking and organelle function (Di Paolo and De Camilli, Nature 443(7112):651-657, 2006). The response triggered by these lipids is heavily dependent on the microenvironment in which they are found. HPLC analysis of labeled phosphoinositides allows quantification of the levels of each phosphoinositide species relative to their precursor, phosphatidylinositol. When combined with subcellular fractionation techniques, this strategy allows measurement of the relative phosphoinositide composition of each membrane fraction or organelle and determination of the microenvironment in which each species is enriched. Here, we describe the steps to separate and quantify total or localized phosphoinositides from cultured cells.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 6 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 6 100%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 2 33%
Student > Postgraduate 2 33%
Researcher 1 17%
Student > Master 1 17%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 3 50%
Medicine and Dentistry 2 33%
Neuroscience 1 17%