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Lipid signaling protocols

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Table of Contents

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    Book Overview
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    Chapter 1 Method for Assaying the Lipid Kinase Phosphatidylinositol-5-phosphate 4-kinase α in Quantitative High-Throughput Screening (qHTS) Bioluminescent Format
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    Chapter 2 Assaying Ceramide Synthase Activity In Vitro and in Living Cells Using Liquid Chromatography-Mass Spectrometry
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    Chapter 3 Lipid Signaling Protocols
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    Chapter 4 Identification of the Interactome of a Palmitoylated Membrane Protein, Phosphatidylinositol 4-Kinase Type II Alpha
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    Chapter 5 Measurement of Long-Chain Fatty Acyl-CoA Synthetase Activity
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    Chapter 6 Qualitative and Quantitative In Vitro Analysis of Phosphatidylinositol Phosphatase Substrate Specificity
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    Chapter 7 Luciferase Reporter Assays to Assess Liver X Receptor Transcriptional Activity
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    Chapter 8 Metabolically Biotinylated Reporters for Electron Microscopic Imaging of Cytoplasmic Membrane Microdomains
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    Chapter 9 Fluorescence Recovery After Photobleaching Analysis of the Diffusional Mobility of Plasma Membrane Proteins: HER3 Mobility in Breast Cancer Cell Membranes.
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    Chapter 10 Isolation and Analysis of Detergent-Resistant Membrane Fractions
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    Chapter 11 Detection of Isolated Mitochondria-Associated ER Membranes Using the Sigma-1 Receptor
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    Chapter 12 Using Surface Plasmon Resonance to Quantitatively Assess Lipid–Protein Interactions
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    Chapter 13 Analyzing Protein–Phosphoinositide Interactions with Liposome Flotation Assays
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    Chapter 14 High-Throughput Fluorometric Assay for Membrane–Protein Interaction
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    Chapter 15 Guidelines for the Use of Protein Domains in Acidic Phospholipid Imaging.
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    Chapter 16 Analysis of Sphingolipid Synthesis and Transport by Metabolic Labeling of Cultured Cells with [ 3 H]Serine
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    Chapter 17 Determination and Characterization of Tetraspanin-Associated Phosphoinositide-4 Kinases in Primary and Neoplastic Liver Cells
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    Chapter 18 Analysis of the Phosphoinositide Composition of Subcellular Membrane Fractions
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    Chapter 19 Single-Molecule Imaging of Signal Transduction via GPI-Anchored Receptors
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    Chapter 20 Measuring Phosphatidylinositol Generation on Biological Membranes
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    Chapter 21 Assay for CDP-Diacylglycerol Generation by CDS in Membrane Fractions
Attention for Chapter 6: Qualitative and Quantitative In Vitro Analysis of Phosphatidylinositol Phosphatase Substrate Specificity
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Chapter title
Qualitative and Quantitative In Vitro Analysis of Phosphatidylinositol Phosphatase Substrate Specificity
Chapter number 6
Book title
Lipid Signaling Protocols
Published in
Methods in molecular biology, January 2016
DOI 10.1007/978-1-4939-3170-5_6
Pubmed ID
Book ISBNs
978-1-4939-3169-9, 978-1-4939-3170-5
Authors

Laura Ren Huey Ip, Christina Anja Gewinner

Abstract

Phosphoinositides compromise a family of eight membrane lipids which play important roles in many cellular signaling pathways. Signaling through phosphoinositides has been shown in a variety of cellular functions such cell proliferation, cell growth, apoptosis, and vesicle trafficking. Phospholipid phosphatases regulate cell signaling by modifying the concentration of phosphoinositides and their dephosphorylated products. To understand the role of individual lipid phosphatases in phosphoinositide turnover and functional signaling, it is crucial to determine the substrate specificity of the lipid phosphatase of interest. In this chapter we describe how the substrate specificity of an individual lipid phosphatase can be qualitatively and quantitatively measured in an in vitro radiometric assay. In addition, we specify the different expression systems and purification methods required to produce the necessary yield and functionality in order to further characterize these enzymes. The outstanding versatility and sensitivity of this assay system are yet unmatched and are therefore currently considered the standard of the field.

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Mendeley readers

The data shown below were compiled from readership statistics for 3 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 3 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 2 67%
Student > Ph. D. Student 1 33%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 2 67%
Medicine and Dentistry 1 33%