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Prioritizing orphan proteins for further study using phylogenomics and gene expression profiles in Streptomyces coelicolor

Overview of attention for article published in BMC Research Notes, September 2011
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Title
Prioritizing orphan proteins for further study using phylogenomics and gene expression profiles in Streptomyces coelicolor
Published in
BMC Research Notes, September 2011
DOI 10.1186/1756-0500-4-325
Pubmed ID
Authors

Mohammad Tauqeer Alam, Eriko Takano, Rainer Breitling

Abstract

Streptomyces coelicolor, a model organism of antibiotic producing bacteria, has one of the largest genomes of the bacterial kingdom, including 7825 predicted protein coding genes. A large number of these genes, nearly 34%, are functionally orphan (hypothetical proteins with unknown function). However, in gene expression time course data, many of these functionally orphan genes show interesting expression patterns.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 27 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Brazil 1 4%
Unknown 26 96%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 8 30%
Student > Master 4 15%
Researcher 3 11%
Professor > Associate Professor 2 7%
Student > Doctoral Student 2 7%
Other 2 7%
Unknown 6 22%
Readers by discipline Count As %
Agricultural and Biological Sciences 14 52%
Biochemistry, Genetics and Molecular Biology 5 19%
Computer Science 1 4%
Social Sciences 1 4%
Unknown 6 22%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 20 December 2013.
All research outputs
#18,801,532
of 23,301,510 outputs
Outputs from BMC Research Notes
#3,055
of 4,306 outputs
Outputs of similar age
#105,290
of 126,986 outputs
Outputs of similar age from BMC Research Notes
#45
of 55 outputs
Altmetric has tracked 23,301,510 research outputs across all sources so far. This one is in the 11th percentile – i.e., 11% of other outputs scored the same or lower than it.
So far Altmetric has tracked 4,306 research outputs from this source. They typically receive a little more attention than average, with a mean Attention Score of 5.7. This one is in the 16th percentile – i.e., 16% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 126,986 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 8th percentile – i.e., 8% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 55 others from the same source and published within six weeks on either side of this one. This one is in the 10th percentile – i.e., 10% of its contemporaries scored the same or lower than it.