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Protein Tyrosine Phosphatases

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Cover of 'Protein Tyrosine Phosphatases'

Table of Contents

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    Book Overview
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    Chapter 1 The Extended Family of Protein Tyrosine Phosphatases
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    Chapter 2 Global RT-PCR and RT-qPCR Analysis of the mRNA Expression of the Human PTPome
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    Chapter 3 Expression, Purification, and Kinetic Analysis of PTP Domains
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    Chapter 4 Peptide Microarrays for Real-Time Kinetic Profiling of Tyrosine Phosphatase Activity of Recombinant Phosphatases and Phosphatases in Lysates of Cells or Tissue Samples
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    Chapter 5 Tailor-Made Protein Tyrosine Phosphatases: In Vitro Site-Directed Mutagenesis of PTEN and PTPRZ-B
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    Chapter 6 Assays to Measure PTEN Lipid Phosphatase Activity In Vitro from Purified Enzyme or Immunoprecipitates
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    Chapter 7 Assessing the Biological Activity of the Glucan Phosphatase Laforin
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    Chapter 8 Discovery and Evaluation of PRL Trimer Disruptors for Novel Anticancer Agents
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    Chapter 9 Analyzing Pseudophosphatase Function
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    Chapter 10 Crystallization of PTP Domains
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    Chapter 11 NMR Spectroscopy to Study MAP Kinase Binding to MAP Kinase Phosphatases
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    Chapter 12 Visualizing and Quantitating the Spatiotemporal Regulation of Ras/ERK Signaling by Dual-Specificity Mitogen-Activated Protein Phosphatases (MKPs)
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    Chapter 13 Protein Tyrosine Phosphatases
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    Chapter 14 Use of Dominant-Negative/Substrate Trapping PTP Mutations to Search for PTP Interactors/Substrates
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    Chapter 15 Protein Tyrosine Phosphatases
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    Chapter 16 Production of Osteoclasts for Studying Protein Tyrosine Phosphatase Signaling
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    Chapter 17 Functional Analysis of Protein Tyrosine Phosphatases in Thrombosis and Hemostasis
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    Chapter 18 Functional Analysis of Dual-Specificity Protein Phosphatases in Angiogenesis
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    Chapter 19 Studying Protein-Tyrosine Phosphatases in Zebrafish
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    Chapter 20 Protein Tyrosine Phosphatases
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    Chapter 21 Protein Tyrosine Phosphatases
Attention for Chapter 5: Tailor-Made Protein Tyrosine Phosphatases: In Vitro Site-Directed Mutagenesis of PTEN and PTPRZ-B
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Chapter title
Tailor-Made Protein Tyrosine Phosphatases: In Vitro Site-Directed Mutagenesis of PTEN and PTPRZ-B
Chapter number 5
Book title
Protein Tyrosine Phosphatases
Published in
Methods in molecular biology, January 2016
DOI 10.1007/978-1-4939-3746-2_5
Pubmed ID
Book ISBNs
978-1-4939-3744-8, 978-1-4939-3746-2
Authors

Sandra Luna, Janire Mingo, Olaia Aurtenetxe, Lorena Blanco, Laura Amo, Jan Schepens, Wiljan J. Hendriks, Rafael Pulido

Abstract

In vitro site-directed mutagenesis (SDM) of protein tyrosine phosphatases (PTPs) is a commonly used approach to experimentally analyze PTP functions at the molecular and cellular level and to establish functional correlations with PTP alterations found in human disease. Here, using the tumor-suppressor PTEN and the receptor-type PTPRZ-B (short isoform from PTPRZ1 gene) phosphatases as examples, we provide a brief insight into the utility of specific mutations in the experimental analysis of PTP functions. We describe a standardized, rapid, and simple method of mutagenesis to perform single and multiple amino acid substitutions, as well as deletions of short nucleotide sequences, based on one-step inverse PCR and DpnI restriction enzyme treatment. This method of SDM is generally applicable to any other protein of interest.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 7 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 7 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 2 29%
Student > Ph. D. Student 2 29%
Unspecified 1 14%
Student > Bachelor 1 14%
Student > Master 1 14%
Other 0 0%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 3 43%
Unspecified 1 14%
Agricultural and Biological Sciences 1 14%
Medicine and Dentistry 1 14%
Unknown 1 14%