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Cancer Systems Biology

Overview of attention for book
Cover of 'Cancer Systems Biology'

Table of Contents

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    Book Overview
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    Chapter 1 Detection of Combinatorial Mutational Patterns in Human Cancer Genomes by Exclusivity Analysis
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    Chapter 2 Discovering Altered Regulation and Signaling Through Network-based Integration of Transcriptomic, Epigenomic, and Proteomic Tumor Data
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    Chapter 3 Analyzing DNA Methylation Patterns During Tumor Evolution
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    Chapter 4 MicroRNA Networks in Breast Cancer Cells
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    Chapter 5 Identifying Genetic Dependencies in Cancer by Analyzing siRNA Screens in Tumor Cell Line Panels
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    Chapter 6 Phosphoproteomics-Based Profiling of Kinase Activities in Cancer Cells
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    Chapter 7 Perseus: A Bioinformatics Platform for Integrative Analysis of Proteomics Data in Cancer Research
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    Chapter 8 Quantitative Analysis of Tyrosine Kinase Signaling Across Differentially Embedded Human Glioblastoma Tumors
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    Chapter 9 Prediction of Clinical Endpoints in Breast Cancer Using NMR Metabolic Profiles
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    Chapter 10 Stochastic and Deterministic Models for the Metastatic Emission Process: Formalisms and Crosslinks
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    Chapter 11 Mechanically Coupled Reaction-Diffusion Model to Predict Glioma Growth: Methodological Details
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    Chapter 12 Profiling Tumor Infiltrating Immune Cells with CIBERSORT
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    Chapter 13 Systems Biology Approaches in Cancer Pathology
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    Chapter 14 Bioinformatics Approaches to Predict Drug Responses from Genomic Sequencing
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    Chapter 15 A Robust Optimization Approach to Cancer Treatment under Toxicity Uncertainty
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    Chapter 16 Modeling of Interactions between Cancer Stem Cells and their Microenvironment: Predicting Clinical Response
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    Chapter 17 Methods for High-throughput Drug Combination Screening and Synergy Scoring
Attention for Chapter 10: Stochastic and Deterministic Models for the Metastatic Emission Process: Formalisms and Crosslinks
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Chapter title
Stochastic and Deterministic Models for the Metastatic Emission Process: Formalisms and Crosslinks
Chapter number 10
Book title
Cancer Systems Biology
Published in
Methods in molecular biology, January 2018
DOI 10.1007/978-1-4939-7493-1_10
Pubmed ID
Book ISBNs
978-1-4939-7492-4, 978-1-4939-7493-1
Authors

Christophe Gomez, Niklas Hartung

Abstract

Although the detection of metastases radically changes prognosis of and treatment decisions for a cancer patient, clinically undetectable micrometastases hamper a consistent classification into localized or metastatic disease. This chapter discusses mathematical modeling efforts that could help to estimate the metastatic risk in such a situation. We focus on two approaches: (1) a stochastic framework describing metastatic emission events at random times, formalized via Poisson processes, and (2) a deterministic framework describing the micrometastatic state through a size-structured density function in a partial differential equation model. Three aspects are addressed in this chapter. First, a motivation for the Poisson process framework is presented and modeling hypotheses and mechanisms are introduced. Second, we extend the Poisson model to account for secondary metastatic emission. Third, we highlight an inherent crosslink between the stochastic and deterministic frameworks and discuss its implications. For increased accessibility the chapter is split into an informal presentation of the results using a minimum of mathematical formalism and a rigorous mathematical treatment for more theoretically interested readers.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 7 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 7 100%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 2 29%
Librarian 1 14%
Professor > Associate Professor 1 14%
Student > Master 1 14%
Unknown 2 29%
Readers by discipline Count As %
Engineering 2 29%
Pharmacology, Toxicology and Pharmaceutical Science 1 14%
Biochemistry, Genetics and Molecular Biology 1 14%
Mathematics 1 14%
Unknown 2 29%