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Bioinformatics Research and Applications

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Cover of 'Bioinformatics Research and Applications'

Table of Contents

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    Book Overview
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    Chapter 1 Deriving Protein Backbone Using Traces Extracted from Density Maps at Medium Resolutions
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    Chapter 2 Binary Contingency Table Method for Analyzing Gene Mutation in Cancer Genome
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    Chapter 3 A Filter-Based Approach for Approximate Circular Pattern Matching
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    Chapter 4 Fast Algorithms for Inferring Gene-Species Associations
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    Chapter 5 Couplet Supertree Based Species Tree Estimation
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    Chapter 6 A Novel Computational Method for Deriving Protein Secondary Structure Topologies Using Cryo-EM Density Maps and Multiple Secondary Structure Predictions
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    Chapter 7 Managing Reproducible Computational Experiments with Curated Proteins in KINARI-2
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    Chapter 8 Protein Crystallization Screening Using Associative Experimental Design
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    Chapter 9 DAM: A Bayesian Method for Detecting Genome-wide Associations on Multiple Diseases
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    Chapter 10 MINED: An Efficient Mutual Information Based Epistasis Detection Method to Improve Quantitative Genetic Trait Prediction
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    Chapter 11 Domain Adaptation with Logistic Regression for the Task of Splice Site Prediction
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    Chapter 12 A Stacking-Based Approach to Identify Translated Upstream Open Reading Frames in Arabidopsis Thaliana
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    Chapter 13 PRESS-PLOT: An Online Server for Protein Structural Analysis and Evaluation with Residue-level Virtual Angle Correlation Plots
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    Chapter 14 Calcium Ion Fluctuations Alter Channel Gating in a Stochastic Luminal Calcium Release Site Model
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    Chapter 15 Interleaving Global and Local Search for Protein Motion Computation
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    Chapter 16 On the Complexity of Duplication-Transfer-Loss Reconciliation with Non-binary Gene Trees
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    Chapter 17 On the Near-Linear Correlation of the Eigenvalues Across BLOSUM Matrices
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    Chapter 18 Predicting RNA Secondary Structures: One-grammar-fits-all Solution
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    Chapter 19 Bioinformatics Research and Applications
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    Chapter 20 Diploid Alignments and Haplotyping
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    Chapter 21 Structural Comparative Analysis of Ecto- NTPDase Models from S. Mansoni and H. Sapiens
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    Chapter 22 Assessing the Robustness of Parsimonious Predictions for Gene Neighborhoods from Reconciled Phylogenies: Supplementary Material
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    Chapter 23 Sorting Signed Circular Permutations by Super Short Reversals
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    Chapter 24 Multiple Alignment of Structures Using Center Of ProTeins
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    Chapter 25 NRRC: A Non-referential Reads Compression Algorithm
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    Chapter 26 New Heuristics for Clustering Large Biological Networks
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    Chapter 27 A Novel Algorithm for Glycan de novo Sequencing Using Tandem Mass Spectrometry
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    Chapter 28 Community Detection-Based Feature Construction for Protein Sequence Classification
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    Chapter 29 Curvilinear Triangular Discretization of Biomedical Images
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    Chapter 30 The Role of miRNAs in Cisplatin-Resistant HeLa Cells
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    Chapter 31 DNA AS X: An Information-Coding-Based Model to Improve the Sensitivity in Comparative Gene Analysis
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    Chapter 32 A Distance-Based Method for Inferring Phylogenetic Networks in the Presence of Incomplete Lineage Sorting
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    Chapter 33 Predicting Protein Functions Based on Dynamic Protein Interaction Networks
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    Chapter 34 An Iterative Approach for Phylogenetic Analysis of Tumor Progression Using FISH Copy Number
Attention for Chapter 32: A Distance-Based Method for Inferring Phylogenetic Networks in the Presence of Incomplete Lineage Sorting
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Chapter title
A Distance-Based Method for Inferring Phylogenetic Networks in the Presence of Incomplete Lineage Sorting
Chapter number 32
Book title
Bioinformatics Research and Applications
Published by
Springer, Cham, June 2015
DOI 10.1007/978-3-319-19048-8_32
Book ISBNs
978-3-31-919047-1, 978-3-31-919048-8
Authors

Yun Yu, Luay Nakhleh

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 7 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 7 100%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 3 43%
Researcher 2 29%
Professor > Associate Professor 1 14%
Student > Doctoral Student 1 14%
Readers by discipline Count As %
Mathematics 2 29%
Biochemistry, Genetics and Molecular Biology 1 14%
Agricultural and Biological Sciences 1 14%
Computer Science 1 14%
Medicine and Dentistry 1 14%
Other 1 14%