↓ Skip to main content

Arabidopsis Protocols

Overview of attention for book
Cover of 'Arabidopsis Protocols'

Table of Contents

  1. Altmetric Badge
    Book Overview
  2. Altmetric Badge
    Chapter 1 Handling Arabidopsis Plants: Growth, Preservation of Seeds, Transformation, and Genetic Crosses
  3. Altmetric Badge
    Chapter 2 Using Arabidopsis-Related Model Species (ARMS): Growth, Genetic Transformation, and Comparative Genomics
  4. Altmetric Badge
    Chapter 3 Growing Arabidopsis In Vitro: Cell Suspensions, In Vitro Culture, and Regeneration
  5. Altmetric Badge
    Chapter 4 Arabidopsis Database and Stock Resources
  6. Altmetric Badge
    Chapter 5 Bioinformatic Tools in Arabidopsis Research
  7. Altmetric Badge
    Chapter 6 Exploiting Natural Variation in Arabidopsis
  8. Altmetric Badge
    Chapter 7 Grafting in Arabidopsis.
  9. Altmetric Badge
    Chapter 8 Agrobacterium tumefaciens-Mediated Transient Transformation of Arabidopsis thaliana Leaves
  10. Altmetric Badge
    Chapter 9 iTILLING: Personalized Mutation Screening
  11. Altmetric Badge
    Chapter 10 Tailor-Made Mutations in Arabidopsis Using Zinc Finger Nucleases
  12. Altmetric Badge
    Chapter 11 Arabidopsis Protocols
  13. Altmetric Badge
    Chapter 12 Generation and Identification of Arabidopsis EMS Mutants
  14. Altmetric Badge
    Chapter 13 Generation and Characterization of Arabidopsis T-DNA Insertion Mutants
  15. Altmetric Badge
    Chapter 14 Identification of EMS-Induced Causal Mutations in Arabidopsis thaliana by Next-Generation Sequencing.
  16. Altmetric Badge
    Chapter 15 Arabidopsis Transformation with Large Bacterial Artificial Chromosomes
  17. Altmetric Badge
    Chapter 16 Global DNA Methylation Analysis Using Methyl-Sensitive Amplification Polymorphism (MSAP)
  18. Altmetric Badge
    Chapter 17 Next-Generation Mapping of Genetic Mutations Using Bulk Population Sequencing
  19. Altmetric Badge
    Chapter 18 Chemical Fingerprinting of Arabidopsis Using Fourier Transform Infrared (FT-IR) Spectroscopic Approaches
  20. Altmetric Badge
    Chapter 19 A Pipeline for (15)N Metabolic Labeling and Phosphoproteome Analysis in Arabidopsis thaliana.
  21. Altmetric Badge
    Chapter 20 Gene expression profiling using DNA microarrays.
  22. Altmetric Badge
    Chapter 21 Forward Chemical Genetic Screening
  23. Altmetric Badge
    Chapter 22 Highly Reproducible ChIP-on-Chip Analysis to Identify Genome-Wide Protein Binding and Chromatin Status in Arabidopsis thaliana.
  24. Altmetric Badge
    Chapter 23 Fluorescence Microscopy
  25. Altmetric Badge
    Chapter 24 Immunocytochemical Fluorescent In Situ Visualization of Proteins In Arabidopsis
  26. Altmetric Badge
    Chapter 25 High-pressure freezing and freeze substitution of Arabidopsis for electron microscopy.
  27. Altmetric Badge
    Chapter 26 Applications of Fluorescent Marker Proteins in Plant Cell Biology
  28. Altmetric Badge
    Chapter 27 Flow Cytometry and Sorting in Arabidopsis
  29. Altmetric Badge
    Chapter 28 Live Imaging of Arabidopsis Development
  30. Altmetric Badge
    Chapter 29 Arabidopsis organelle isolation and characterization.
  31. Altmetric Badge
    Chapter 30 Analysis of Subcellular Metabolite Distributions Within Arabidopsis thaliana Leaf Tissue: A Primer for Subcellular Metabolomics.
  32. Altmetric Badge
    Chapter 31 Hormone Profiling
  33. Altmetric Badge
    Chapter 32 Purification of Protein Complexes and Characterization of Protein-Protein Interactions
  34. Altmetric Badge
    Chapter 33 Protein Fragment Bimolecular Fluorescence Complementation Analyses for the In vivo Study of Protein-Protein Interactions and Cellular Protein Complex Localizations
  35. Altmetric Badge
    Chapter 34 The Split-Ubiquitin System for the Analysis of Three-Component Interactions
  36. Altmetric Badge
    Chapter 35 RNA-Binding Protein Immunoprecipitation from Whole-Cell Extracts
  37. Altmetric Badge
    Chapter 36 High-Throughput Analysis of Protein-DNA Binding Affinity
Attention for Chapter 4: Arabidopsis Database and Stock Resources
Altmetric Badge

Citations

dimensions_citation
25 Dimensions

Readers on

mendeley
17 Mendeley
You are seeing a free-to-access but limited selection of the activity Altmetric has collected about this research output. Click here to find out more.
Chapter title
Arabidopsis Database and Stock Resources
Chapter number 4
Book title
Arabidopsis Protocols
Published in
Methods in molecular biology, January 2014
DOI 10.1007/978-1-62703-580-4_4
Pubmed ID
Book ISBNs
978-1-62703-579-8, 978-1-62703-580-4
Authors

Donghui Li, Kate Dreher, Emma Knee, Jelena Brkljacic, Erich Grotewold, Tanya Z. Berardini, Philippe Lamesch, Margarita Garcia-Hernandez, Leonore Reiser, Eva Huala

Abstract

The volume of Arabidopsis information has increased enormously in recent years as a result of the sequencing of the reference genome and other large-scale functional genomics projects. Much of the data is stored in public databases, where data are organized, analyzed, and made freely accessible to the research community. These databases are resources that researchers can utilize for making predictions and developing testable hypotheses. The methods in this chapter describe ways to access and utilize Arabidopsis data and genomic resources found in databases and stock centers.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 17 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 1 6%
Germany 1 6%
Unknown 15 88%

Demographic breakdown

Readers by professional status Count As %
Researcher 6 35%
Student > Doctoral Student 2 12%
Student > Ph. D. Student 2 12%
Lecturer 1 6%
Other 1 6%
Other 3 18%
Unknown 2 12%
Readers by discipline Count As %
Agricultural and Biological Sciences 11 65%
Biochemistry, Genetics and Molecular Biology 2 12%
Chemistry 1 6%
Medicine and Dentistry 1 6%
Unknown 2 12%