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4SALE – A tool for synchronous RNA sequence and secondary structure alignment and editing

Overview of attention for article published in BMC Bioinformatics, November 2006
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1 Wikipedia page

Citations

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328 Dimensions

Readers on

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349 Mendeley
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1 CiteULike
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Title
4SALE – A tool for synchronous RNA sequence and secondary structure alignment and editing
Published in
BMC Bioinformatics, November 2006
DOI 10.1186/1471-2105-7-498
Pubmed ID
Authors

Philipp N Seibel, Tobias Müller, Thomas Dandekar, Jörg Schultz, Matthias Wolf

Abstract

In sequence analysis the multiple alignment builds the fundament of all proceeding analyses. Errors in an alignment could strongly influence all succeeding analyses and therefore could lead to wrong predictions. Hand-crafted and hand-improved alignments are necessary and meanwhile good common practice. For RNA sequences often the primary sequence as well as a secondary structure consensus is well known, e.g., the cloverleaf structure of the t-RNA. Recently, some alignment editors are proposed that are able to include and model both kinds of information. However, with the advent of a large amount of reliable RNA sequences together with their solved secondary structures (available from e.g. the ITS2 Database), we are faced with the problem to handle sequences and their associated secondary structures synchronously.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 349 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Germany 9 3%
United States 6 2%
Brazil 5 1%
United Kingdom 4 1%
Portugal 3 <1%
France 3 <1%
Canada 2 <1%
Australia 1 <1%
Italy 1 <1%
Other 9 3%
Unknown 306 88%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 114 33%
Researcher 68 19%
Student > Master 51 15%
Student > Bachelor 23 7%
Student > Doctoral Student 15 4%
Other 50 14%
Unknown 28 8%
Readers by discipline Count As %
Agricultural and Biological Sciences 164 47%
Computer Science 64 18%
Biochemistry, Genetics and Molecular Biology 43 12%
Engineering 9 3%
Mathematics 9 3%
Other 24 7%
Unknown 36 10%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 3. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 20 January 2008.
All research outputs
#7,454,298
of 22,789,076 outputs
Outputs from BMC Bioinformatics
#3,023
of 7,279 outputs
Outputs of similar age
#23,887
of 68,433 outputs
Outputs of similar age from BMC Bioinformatics
#14
of 59 outputs
Altmetric has tracked 22,789,076 research outputs across all sources so far. This one is in the 44th percentile – i.e., 44% of other outputs scored the same or lower than it.
So far Altmetric has tracked 7,279 research outputs from this source. They typically receive a little more attention than average, with a mean Attention Score of 5.4. This one has gotten more attention than average, scoring higher than 50% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 68,433 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 15th percentile – i.e., 15% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 59 others from the same source and published within six weeks on either side of this one. This one is in the 23rd percentile – i.e., 23% of its contemporaries scored the same or lower than it.