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Selenoproteins

Overview of attention for book
Cover of 'Selenoproteins'

Table of Contents

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    Book Overview
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    Chapter 1 SECISearch3 and Seblastian: In-Silico Tools to Predict SECIS Elements and Selenoproteins
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    Chapter 2 Selenoprofiles: A Computational Pipeline for Annotation of Selenoproteins
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    Chapter 3 SelGenAmic: An Algorithm for Selenoprotein Gene Assembly
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    Chapter 4 Selenocysteine tRNA[Ser]Sec, the Central Component of Selenoprotein Biosynthesis: Isolation, Identification, Modification, and Sequencing
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    Chapter 5 Identification and Characterization of Proteins that Bind to Selenoprotein 3′ UTRs
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    Chapter 6 Specific Chemical Approaches for Studying Mammalian Ribosomes Complexed with Ligands Involved in Selenoprotein Synthesis
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    Chapter 7 In Vitro Translation Assays for Selenocysteine Insertion
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    Chapter 8 Studying Selenoprotein mRNA Translation Using RNA-Seq and Ribosome Profiling
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    Chapter 9 Modification of Selenoprotein mRNAs by Cap Tri-methylation
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    Chapter 10 Total Selenium Quantification in Biological Samples by Inductively Coupled Plasma Mass Spectrometry (ICP-MS)
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    Chapter 11 Quantification of SeMet and SeCys in Biological Fluids and Tissues by Liquid Chromatography Coupled to Inductively Coupled Plasma Mass Spectrometry (HPLC-ICP MS)
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    Chapter 12 Simultaneous Speciation of Selenoproteins and Selenometabolites in Plasma and Serum
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    Chapter 13 Radioactive 75 Se Labeling and Detection of Selenoproteins
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    Chapter 14 Nonradioactive Isotopic Labeling and Tracing of Selenoproteins in Cultured Cell Lines
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    Chapter 15 Detection of Selenoproteins by Laser Ablation Inductively Coupled Plasma Mass Spectrometry (LA-ICP MS) in Immobilized pH Gradient (IPG) Strips
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    Chapter 16 Imaging of Selenium by Laser Ablation Inductively Coupled Plasma Mass Spectrometry (LA-ICP-MS) in 2-D Electrophoresis Gels and Biological Tissues
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    Chapter 17 Overexpression of Recombinant Selenoproteins in E. coli
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    Chapter 18 Preparation of Selenocysteine-Containing Forms of Human SELENOK and SELENOS
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    Chapter 19 Selenocysteine-Mediated Expressed Protein Ligation of SELENOM
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    Chapter 20 Monitoring of Methionine Sulfoxide Content and Methionine Sulfoxide Reductase Activity
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    Chapter 21 Selective Evaluation of Thioredoxin Reductase Enzymatic Activities
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    Chapter 22 Association of Single Nucleotide Polymorphisms in Selenoprotein Genes with Cancer Risk
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    Chapter 23 Identification of Genetic Disorders Causing Disruption of Selenoprotein Biosynthesis
Attention for Chapter 4: Selenocysteine tRNA[Ser]Sec, the Central Component of Selenoprotein Biosynthesis: Isolation, Identification, Modification, and Sequencing
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Chapter title
Selenocysteine tRNA[Ser]Sec, the Central Component of Selenoprotein Biosynthesis: Isolation, Identification, Modification, and Sequencing
Chapter number 4
Book title
Selenoproteins
Published in
Methods in molecular biology, January 2018
DOI 10.1007/978-1-4939-7258-6_4
Pubmed ID
Book ISBNs
978-1-4939-7257-9, 978-1-4939-7258-6
Authors

Bradley A. Carlson, Byeong Jae Lee, Petra A. Tsuji, Paul R. Copeland, Ulrich Schweizer, Vadim N. Gladyshev, Dolph L. Hatfield, Carlson, Bradley A., Lee, Byeong Jae, Tsuji, Petra A., Copeland, Paul R., Schweizer, Ulrich, Gladyshev, Vadim N., Hatfield, Dolph L.

Abstract

The selenocysteine (Sec) tRNA([Ser]Sec) population consists of two isoforms that differ from each other by a single 2'-O-methylribosyl moiety at position 34 (Um34). These two isoforms, which are encoded in a single gene, Trsp, and modified posttranscriptionally, are involved individually in the synthesis of two subclasses of selenoproteins, designated housekeeping and stress-related selenoproteins. Techniques used in obtaining these isoforms for their characterization include extraction of RNA from mammalian cells and tissues, purifying the tRNA([Ser]Sec) population by one or more procedures, and finally resolving the two isoforms from each other. Since some of the older techniques for isolating tRNA([Ser]Sec) and resolving the isoforms are used in only a few laboratories, these procedures will be discussed briefly and references provided for more detailed information, while the more recently developed procedures are discussed in detail. In addition, a novel technique that was developed in sequencing tRNA([Ser]Sec) for identifying their occurrence in other organisms is also presented.

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X Demographics

The data shown below were collected from the profiles of 3 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 30 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 30 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 6 20%
Student > Master 5 17%
Student > Ph. D. Student 4 13%
Student > Bachelor 2 7%
Student > Doctoral Student 2 7%
Other 5 17%
Unknown 6 20%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 10 33%
Agricultural and Biological Sciences 6 20%
Neuroscience 2 7%
Nursing and Health Professions 1 3%
Unspecified 1 3%
Other 2 7%
Unknown 8 27%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 2. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 28 June 2018.
All research outputs
#14,364,802
of 23,002,898 outputs
Outputs from Methods in molecular biology
#4,221
of 13,156 outputs
Outputs of similar age
#240,393
of 442,250 outputs
Outputs of similar age from Methods in molecular biology
#432
of 1,498 outputs
Altmetric has tracked 23,002,898 research outputs across all sources so far. This one is in the 35th percentile – i.e., 35% of other outputs scored the same or lower than it.
So far Altmetric has tracked 13,156 research outputs from this source. They receive a mean Attention Score of 3.4. This one has gotten more attention than average, scoring higher than 64% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 442,250 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 42nd percentile – i.e., 42% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 1,498 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 66% of its contemporaries.