Plant Epigenetics

Chapter 1 Plant Epigenetics

Chapter 2 Plant Epigenetics

Chapter 4 Detection of Changes in Global Genome Methylation Using the Cytosine-Extension Assay

Chapter 5 In Situ Analysis of DNA Methylation in Plants

Chapter 6 Analysis of Mutation/Rearrangement Frequencies and Methylation Patterns at a Given DNA Locus Using Restriction Fragment Length Polymorphism

Chapter 7 Isoschizomers and Amplified Fragment Length Polymorphism for the Detection of Specific Cytosine Methylation Changes

Chapter 8 Analysis of small RNA populations using hybridization to DNA tiling arrays.

Chapter 9 Northern Blotting Techniques for Small RNAs

Chapter 10 qRT-PCR of Small RNAs.

Chapter 11 Cloning New Small RNA Sequences

Chapter 12 Genome-Wide Mapping of Protein-DNA Interaction by Chromatin Immunoprecipitation and DNA Microarray Hybridization (ChIP-chip). Part A: ChIP-chip Molecular Methods

Chapter 13 Genome-Wide Mapping of Protein-DNA Interaction by Chromatin Immunoprecipitation and DNA Microarray Hybridization (ChIP-chip). Part B: ChIP-chip Data Analysis

Chapter 14 Metaanalysis of ChIP-chip Data

Chapter 15 Chromatin Immunoprecipitation Protocol for Histone Modifications and Protein–DNA Binding Analyses in Arabidopsis

Chapter 16 cDNA Libraries for Virus-Induced Gene Silencing

Chapter 17 Detection and Quantification of DNA Strand Breaks Using the ROPS (Random Oligonucleotide Primed Synthesis) Assay

Chapter 18 Reporter Gene-Based Recombination Lines for Studies of Genome Stability

Chapter 19 Plant Transgenesis