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Plant DNA Fingerprinting and Barcoding

Overview of attention for book
Cover of 'Plant DNA Fingerprinting and Barcoding'

Table of Contents

  1. Altmetric Badge
    Book Overview
  2. Altmetric Badge
    Chapter 1 A Taxonomist’s View on Genomic Authentication
  3. Altmetric Badge
    Chapter 2 DNA Fingerprinting, DNA Barcoding, and Next Generation Sequencing Technology in Plants
  4. Altmetric Badge
    Chapter 3 Challenges in the DNA Barcoding of Plant Material
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    Chapter 4 Plant Genetics for Forensic Applications
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    Chapter 5 DNA Purification from Multiple Sources in Plant Research with Homemade Silica Resins
  7. Altmetric Badge
    Chapter 6 Random Amplified Marker Technique for Plants Rich in Polyphenols
  8. Altmetric Badge
    Chapter 7 Amplified Fragment Length Polymorphism: An Invaluable Fingerprinting Technique for Genomic, Transcriptomic, and Epigenetic Studies
  9. Altmetric Badge
    Chapter 8 Restriction Fragment Length Polymorphism of the 5S-rRNA-NTS Region: A Rapid and Precise Method for Plant Identification
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    Chapter 9 ISSR: A Reliable and Cost-Effective Technique for Detection of DNA Polymorphism.
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    Chapter 10 Development of Sequence Characterized Amplified Region from Random Amplified Polymorphic DNA Amplicons
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    Chapter 11 Authentication of Medicinal Plants by SNP-Based Multiplex PCR
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    Chapter 12 Multiplex PCR Method to Discriminate Artemisia iwayomogi from Other Artemisia Plants
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    Chapter 13 Loop-Mediated Isothermal Amplification for the Detection of Plant Pathogens
  15. Altmetric Badge
    Chapter 14 Genomic DNA extraction and barcoding of endophytic fungi.
  16. Altmetric Badge
    Chapter 15 Using GenBank® for Genomic Authentication: A Tutorial
Attention for Chapter 14: Genomic DNA extraction and barcoding of endophytic fungi.
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Chapter title
Genomic DNA extraction and barcoding of endophytic fungi.
Chapter number 14
Book title
Plant DNA Fingerprinting and Barcoding
Published in
Methods in molecular biology, February 2012
DOI 10.1007/978-1-61779-609-8_14
Pubmed ID
Book ISBNs
978-1-61779-608-1, 978-1-61779-609-8
Authors

Diaz PL, Hennell JR, Sucher NJ, Diaz, Patricia L., Hennell, James R., Sucher, Nikolaus J., Patricia L. Diaz, James R. Hennell, Nikolaus J. Sucher

Abstract

Endophytes live inter- and/or intracellularly inside healthy aboveground tissues of plants without causing disease. Endophytic fungi are found in virtually every vascular plant species examined. The origins of this symbiotic relationship between endophytes go back to the emergence of vascular plants. Endophytic fungi receive nutrition and protection from their hosts while the plants benefit from the production of fungal secondary metabolites, which enhance the host plants' resistance to herbivores, pathogens, and various abiotic stresses. Endophytic fungi have attracted increased interest as potential sources of secondary metabolites with agricultural, industrial, and medicinal use. This chapter provides detailed protocols for isolation of genomic DNA from fungal endophytes and its use in polymerase chain reaction-based amplification of the internal transcribed spacer region between the conserved flanking regions of the small and large subunit of ribosomal RNA for barcoding purposes.

Twitter Demographics

The data shown below were collected from the profile of 1 tweeter who shared this research output. Click here to find out more about how the information was compiled.

Mendeley readers

The data shown below were compiled from readership statistics for 62 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 2 3%
Iran, Islamic Republic of 1 2%
Sweden 1 2%
Unknown 58 94%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 16 26%
Researcher 13 21%
Student > Master 7 11%
Student > Bachelor 6 10%
Student > Postgraduate 4 6%
Other 14 23%
Unknown 2 3%
Readers by discipline Count As %
Agricultural and Biological Sciences 33 53%
Biochemistry, Genetics and Molecular Biology 11 18%
Environmental Science 5 8%
Medicine and Dentistry 4 6%
Engineering 2 3%
Other 4 6%
Unknown 3 5%

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 18 August 2012.
All research outputs
#8,758,786
of 11,012,252 outputs
Outputs from Methods in molecular biology
#3,822
of 7,569 outputs
Outputs of similar age
#78,281
of 109,568 outputs
Outputs of similar age from Methods in molecular biology
#26
of 49 outputs
Altmetric has tracked 11,012,252 research outputs across all sources so far. This one is in the 11th percentile – i.e., 11% of other outputs scored the same or lower than it.
So far Altmetric has tracked 7,569 research outputs from this source. They receive a mean Attention Score of 2.0. This one is in the 32nd percentile – i.e., 32% of its peers scored the same or lower than it.
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We're also able to compare this research output to 49 others from the same source and published within six weeks on either side of this one. This one is in the 24th percentile – i.e., 24% of its contemporaries scored the same or lower than it.