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Chromatin Remodeling

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Cover of 'Chromatin Remodeling'

Table of Contents

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    Book Overview
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    Chapter 1 Strain Construction and Screening Methods for a Yeast Histone H3/H4 Mutant Library
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    Chapter 2 Measuring Dynamic Changes in Histone Modifications and Nucleosome Density during Activated Transcription in Budding Yeast
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    Chapter 3 Monitoring the Effects of Chromatin Remodelers on Long-Range Interactions In Vivo
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    Chapter 4 Measuring Nucleosome Occupancy In Vivo by Micrococcal Nuclease
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    Chapter 5 Analysis of Nucleosome Positioning Using a Nucleosome-Scanning Assay
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    Chapter 6 Assaying Chromatin Structure and Remodeling by Restriction Enzyme Accessibility
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    Chapter 7 Generation of DNA Circles in Yeast by Inducible Site-Specific Recombination
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    Chapter 8 Chromatin Remodeling
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    Chapter 9 Simultaneous Single-Molecule Detection of Endogenous C-5 DNA Methylation and Chromatin Accessibility Using MAPit
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    Chapter 10 Analysis of Stable and Transient Protein–Protein Interactions
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    Chapter 11 Monitoring dynamic binding of chromatin proteins in vivo by fluorescence recovery after photobleaching.
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    Chapter 12 Monitoring dynamic binding of chromatin proteins in vivo by fluorescence correlation spectroscopy and temporal image correlation spectroscopy.
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    Chapter 13 Analysis of Chromatin Structure in Plant Cells
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    Chapter 14 Analysis of Histones and Histone Variants in Plants
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    Chapter 15 Reconstitution of Modified Chromatin Templates for In Vitro Functional Assays
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    Chapter 16 A Defined In Vitro System to Study ATP-Dependent Remodeling of Short Chromatin Fibers
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    Chapter 17 In Vitro Reconstitution of In Vivo-Like Nucleosome Positioning on Yeast DNA
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    Chapter 18 Activator-Dependent Acetylation of Chromatin Model Systems
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    Chapter 19 Mapping Assembly Favored and Remodeled Nucleosome Positions on Polynucleosomal Templates
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    Chapter 20 Analysis of Changes in Nucleosome Conformation Using Fluorescence Resonance Energy Transfer
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    Chapter 21 Preparation of Nucleosomes Containing a Specific H2A–H2A Cross-Link Forming a DNA-Constraining Loop Structure
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    Chapter 22 Sulfyhydryl-Reactive Site-Directed Cross-Linking as a Method for Probing the Tetrameric Structure of Histones H3 and H4
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    Chapter 23 Genomic Approaches for Determining Nucleosome Occupancy in Yeast
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    Chapter 24 Genome-wide approaches to determining nucleosome occupancy in metazoans using MNase-Seq
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    Chapter 25 Salt Fractionation of Nucleosomes for Genome-Wide Profiling
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    Chapter 26 Quantitative analysis of genome-wide chromatin remodeling.
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    Chapter 27 Computational Analysis of Nucleosome Positioning
Attention for Chapter 24: Genome-wide approaches to determining nucleosome occupancy in metazoans using MNase-Seq
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