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Computational Biology of Transcription Factor Binding

Overview of attention for book
Cover of 'Computational Biology of Transcription Factor Binding'

Table of Contents

  1. Altmetric Badge
    Book Overview
  2. Altmetric Badge
    Chapter 1 An Overview of the Computational Analyses and Discovery of Transcription Factor Binding Sites
  3. Altmetric Badge
    Chapter 2 Components and mechanisms of regulation of gene expression.
  4. Altmetric Badge
    Chapter 3 Regulatory Regions in DNA: Promoters, Enhancers, Silencers, and Insulators
  5. Altmetric Badge
    Chapter 4 Three-Dimensional Structures of DNA-Bound Transcriptional Regulators
  6. Altmetric Badge
    Chapter 5 Computational Biology of Transcription Factor Binding
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    Chapter 6 Motif Discovery Using Expectation Maximization and Gibbs’ Sampling
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    Chapter 7 Probabilistic Approaches to Transcription Factor Binding Site Prediction
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    Chapter 8 The Motif Tool Assessment Platform (MTAP) for Sequence-Based Transcription Factor Binding Site Prediction Tools
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    Chapter 9 Computational Analysis of ChIP-seq Data
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    Chapter 10 Probabilistic Peak Calling and Controlling False Discovery Rate Estimations in Transcription Factor Binding Site Mapping from ChIP-seq
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    Chapter 11 Sequence Analysis of Chromatin Immunoprecipitation Data for Transcription Factors
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    Chapter 12 Inferring Protein–DNA Interaction Parameters from SELEX Experiments
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    Chapter 13 Kernel-Based Identification of Regulatory Modules
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    Chapter 14 Identification of Transcription Factor Binding Sites Derived from Transposable Element Sequences Using ChIP-seq
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    Chapter 15 Target Gene Identification via Nuclear Receptor Binding Site Prediction
  17. Altmetric Badge
    Chapter 16 Computing Chromosome Conformation
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    Chapter 17 Large-Scale Identification and Analysis of C-Proteins
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    Chapter 18 Evolution of cis -Regulatory Sequences in Drosophila
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    Chapter 19 Regulating the Regulators: Modulators of Transcription Factor Activity
  21. Altmetric Badge
    Chapter 20 Annotating the Regulatory Genome
  22. Altmetric Badge
    Chapter 21 Computational Identification of Plant Transcription Factors and the Construction of the PlantTFDB Database
  23. Altmetric Badge
    Chapter 22 Practical Computational Methods for Regulatory Genomics: A cis GRN-Lexicon and cis GRN-Browser for Gene Regulatory Networks
  24. Altmetric Badge
    Chapter 23 Reconstructing Transcriptional Regulatory Networks Using Three-Way Mutual Information and Bayesian Networks
  25. Altmetric Badge
    Chapter 24 Computational Biology of Transcription Factor Binding
Attention for Chapter 5: Computational Biology of Transcription Factor Binding
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  • Average Attention Score compared to outputs of the same age and source

Mentioned by

wikipedia
2 Wikipedia pages

Citations

dimensions_citation
16 Dimensions

Readers on

mendeley
127 Mendeley
citeulike
2 CiteULike
Summary Wikipedia Dimensions citations
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Chapter title
Computational Biology of Transcription Factor Binding
Chapter number 5
Book title
Computational Biology of Transcription Factor Binding
Published in
Methods in molecular biology, August 2010
DOI 10.1007/978-1-60761-854-6_5
Pubmed ID
20827586
Book ISBNs
978-1-60761-853-9, 978-1-60761-854-6
Authors

Solovyev, Victor V., Shahmuradov, Ilham A., Salamov, Asaf A., Victor V. Solovyev, Ilham A. Shahmuradov, Asaf A. Salamov

View on publisher site
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 127 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 1 <1%
Turkey 1 <1%
Unknown 125 98%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 32 25%
Researcher 24 19%
Student > Master 9 7%
Student > Bachelor 9 7%
Professor 8 6%
Other 18 14%
Unknown 27 21%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 36 28%
Agricultural and Biological Sciences 32 25%
Medicine and Dentistry 8 6%
Computer Science 2 2%
Immunology and Microbiology 2 2%
Other 14 11%
Unknown 33 26%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 3. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 07 April 2019.
All research outputs
#7,510,637
of 22,940,083 outputs
Outputs from Methods in molecular biology
#2,332
of 13,131 outputs
Outputs of similar age
#34,077
of 95,365 outputs
Outputs of similar age from Methods in molecular biology
#5
of 18 outputs
Altmetric has tracked 22,940,083 research outputs across all sources so far. This one is in the 44th percentile – i.e., 44% of other outputs scored the same or lower than it.
So far Altmetric has tracked 13,131 research outputs from this source. They receive a mean Attention Score of 3.4. This one has done well, scoring higher than 76% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 95,365 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 23rd percentile – i.e., 23% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 18 others from the same source and published within six weeks on either side of this one. This one is in the 44th percentile – i.e., 44% of its contemporaries scored the same or lower than it.

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