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Parasite Genomics Protocols

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Cover of 'Parasite Genomics Protocols'

Table of Contents

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    Book Overview
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    Chapter 1 The eukaryotic pathogen databases: a functional genomic resource integrating data from human and veterinary parasites.
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    Chapter 2 From sequence mapping to genome assemblies.
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    Chapter 3 Sequencing and annotation of mitochondrial genomes from individual parasitic helminths.
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    Chapter 4 A Beginners Guide to Estimating the Non-synonymous to Synonymous Rate Ratio of all Protein-Coding Genes in a Genome.
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    Chapter 5 Exploiting Genetic Variation to Discover Genes Involved in Important Disease Phenotypes
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    Chapter 6 Identification and analysis of ingi-related retroposons in the trypanosomatid genomes.
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    Chapter 7 Approaches for Studying mRNA Decay Mediated by SIDER2 Retroposons in Leishmania
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    Chapter 8 Gene Suppression in Schistosomes Using RNAi.
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    Chapter 9 Construction of Trypanosoma brucei Illumina RNA-Seq Libraries Enriched for Transcript Ends.
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    Chapter 10 Techniques to Study Epigenetic Control and the Epigenome in Parasites
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    Chapter 11 The Genome-Wide Identification of Promoter Regions in Toxoplasma gondii.
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    Chapter 12 RNA-Seq Approaches for Determining mRNA Abundance in Leishmania.
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    Chapter 13 Protein microarrays for parasite antigen discovery.
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    Chapter 14 A transposon-based tool for transformation and mutagenesis in trypanosomatid protozoa.
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    Chapter 15 Separation of Basic Proteins from Leishmania Using a Combination of Free Flow Electrophoresis (FFE) and 2D Electrophoresis (2-DE) Under Basic Conditions
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    Chapter 16 Proteomic Analysis of Posttranslational Modifications Using iTRAQ in Leishmania.
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    Chapter 17 Large-Scale Differential Proteome Analysis in Plasmodium falciparum Under Drug Treatment.
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    Chapter 18 Parasite Genomics Protocols
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    Chapter 19 Molecular Genotyping of Trypanosoma cruzi for Lineage Assignment and Population Genetics.
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    Chapter 20 Screening Leishmania donovani Complex-Specific Genes Required for Visceral Disease.
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    Chapter 21 ERRATUM: From Sequence Mapping to Genome Assemblies
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