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De novo assembly and characterization of transcriptomes of early-stage fruit from two genotypes of Annona squamosa L. with contrast in seed number

Overview of attention for article published in BMC Genomics, January 2015
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2 tweeters

Citations

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37 Mendeley
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Title
De novo assembly and characterization of transcriptomes of early-stage fruit from two genotypes of Annona squamosa L. with contrast in seed number
Published in
BMC Genomics, January 2015
DOI 10.1186/s12864-015-1248-3
Pubmed ID
Authors

Yogesh Gupta, Ashish K Pathak, Kashmir Singh, Shrikant S Mantri, Sudhir P Singh, Rakesh Tuli

Abstract

Annona squamosa L., a popular fruit tree, is the most widely cultivated species of the genus Annona. The lack of transcriptomic and genomic information limits the scope of genome investigations in this important shrub. It bears aggregate fruits with numerous seeds. A few rare accessions with very few seeds have been reported for Annona. A massive pyrosequencing (Roche, 454 GS FLX+) of transcriptome from early stages of fruit development (0, 4, 8 and 12 days after pollination) was performed to produce expression datasets in two genotypes, Sitaphal and NMK-1, that show a contrast in the number of seeds set in fruits. The data reported here is the first source of genome-wide differential transcriptome sequence in two genotypes of A. squamosa, and identifies several candidate genes related to seed development.

Twitter Demographics

The data shown below were collected from the profiles of 2 tweeters who shared this research output. Click here to find out more about how the information was compiled.

Mendeley readers

The data shown below were compiled from readership statistics for 37 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Chile 1 3%
United States 1 3%
Norway 1 3%
Unknown 34 92%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 10 27%
Researcher 9 24%
Student > Postgraduate 4 11%
Professor 2 5%
Student > Bachelor 2 5%
Other 7 19%
Unknown 3 8%
Readers by discipline Count As %
Agricultural and Biological Sciences 22 59%
Biochemistry, Genetics and Molecular Biology 4 11%
Immunology and Microbiology 3 8%
Medicine and Dentistry 1 3%
Unknown 7 19%

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 16 March 2015.
All research outputs
#9,508,961
of 12,373,620 outputs
Outputs from BMC Genomics
#5,237
of 7,313 outputs
Outputs of similar age
#141,578
of 220,713 outputs
Outputs of similar age from BMC Genomics
#16
of 19 outputs
Altmetric has tracked 12,373,620 research outputs across all sources so far. This one is in the 19th percentile – i.e., 19% of other outputs scored the same or lower than it.
So far Altmetric has tracked 7,313 research outputs from this source. They receive a mean Attention Score of 4.3. This one is in the 22nd percentile – i.e., 22% of its peers scored the same or lower than it.
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We're also able to compare this research output to 19 others from the same source and published within six weeks on either side of this one. This one is in the 10th percentile – i.e., 10% of its contemporaries scored the same or lower than it.