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Pseudomonas Methods and Protocols

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Cover of 'Pseudomonas Methods and Protocols'

Table of Contents

  1. Altmetric Badge
    Book Overview
  2. Altmetric Badge
    Chapter 1 Gene Transfer: Transduction
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    Chapter 2 Gene Transfer: Transformation/Electroporation
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    Chapter 3 Gene transfer: conjugation.
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    Chapter 4 Pseudomonas Bacteriophage Isolation and Production
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    Chapter 5 Genotyping Methods
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    Chapter 6 Drug Susceptibility Testing by Dilution Methods
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    Chapter 7 Plate-Based Assay for Swimming Motility in Pseudomonas aeruginosa
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    Chapter 8 Plate-Based Assay for Swarming Motility in Pseudomonas aeruginosa
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    Chapter 9 Motility Assay: Twitching Motility
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    Chapter 10 Qualitative and Quantitative Assays for Flagellum-Mediated Chemotaxis
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    Chapter 11 Microscopic Analysis: Morphotypes and Cellular Appendages
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    Chapter 12 Determination of Lipolytic Enzyme Activities
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    Chapter 13 Elastinolytic and Proteolytic Enzymes
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    Chapter 14 In vitro Assays to Monitor the Activity of Pseudomonas aeruginosa Type III Secreted Proteins
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    Chapter 15 Cell Fractionation
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    Chapter 16 Characterization of Molecular Interactions Using Isothermal Titration Calorimetry
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    Chapter 17 Proteomic analysis.
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    Chapter 18 Membrane Proteomics of Pseudomonas aeruginosa
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    Chapter 19 Construction of Pseudomonas aeruginosa Two-Hybrid Libraries for High-Throughput Assays
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    Chapter 20 Biosensors for Qualitative and Semiquantitative Analysis of Quorum Sensing Signal Molecules
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    Chapter 21 LC-MS/MS Quantitative Analysis of Quorum Sensing Signal Molecules
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    Chapter 22 LC/MS/MS-Based Quantitative Assay for the Secondary Messenger Molecule, c-di-GMP.
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    Chapter 23 Metabolic footprinting: extracellular metabolomic analysis.
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    Chapter 24 Pyoverdine and Pyochelin Measurements
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    Chapter 25 Measurement of Phenazines in Bacterial Cultures
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    Chapter 26 Extraction and Measurement of NAD(P) + and NAD(P)H
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    Chapter 27 Cyanide Measurements in Bacterial Culture and Sputum
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    Chapter 28 Monitoring iron uptake by siderophores.
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    Chapter 29 Exopolysaccharide quantification.
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    Chapter 30 Liquid Chromatography/Mass Spectrometry for the Identification and Quantification of Rhamnolipids
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    Chapter 31 LPS Quantitation Procedures
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    Chapter 32 Monitoring lectin interactions with carbohydrates.
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    Chapter 33 Mining the Pseudomonas Genome
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    Chapter 34 Identification of Bacterial Small RNAs by RNA Sequencing.
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    Chapter 35 Gene Amplification and qRT-PCR
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    Chapter 36 The Standard European Vector Architecture (SEVA) Plasmid Toolkit
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    Chapter 37 Chromosomal integration of transcriptional fusions.
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    Chapter 38 A Method to Capture Large DNA Fragments from Genomic DNA
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    Chapter 39 Transposon mutagenesis.
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    Chapter 40 Site-Directed Mutagenesis and Gene Deletion Using Reverse Genetics
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    Chapter 41 Signature-Tagged Mutagenesis
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    Chapter 42 Construction of a Pseudomonas aeruginosa Genomic DNA Library
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    Chapter 43 Pseudomonas Methods and Protocols
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    Chapter 44 Promoter fusions with optical outputs in individual cells and in populations.
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    Chapter 45 Chromatin Immunoprecipitation for ChIP-chip and ChIP-seq.
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    Chapter 46 Pseudomonas Methods and Protocols
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    Chapter 47 Methods for studying biofilm formation: flow cells and confocal laser scanning microscopy.
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    Chapter 48 Biofilm formation in the 96-well microtiter plate.
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    Chapter 49 Methods for Studying Biofilm Dispersal in Pseudomonas aeruginosa
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    Chapter 50 Pseudomonas aeruginosa PA14 Pathogenesis in Caenorhabditis elegans
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    Chapter 51 Assessing Pseudomonas aeruginosa Virulence Using a Nonmammalian Host: Dictyostelium discoideum
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    Chapter 52 Assessing Pseudomonas Virulence with Nonmammalian Host: Galleria mellonella
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    Chapter 53 Assessing Pseudomonas Virulence with the Nonmammalian Host Model: Arabidopsis thaliana
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    Chapter 54 Assessing Pseudomonas aeruginosa Persister/Antibiotic Tolerant Cells
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    Chapter 55 Assessing Pseudomonas Virulence with Nonmammalian Host: Zebrafish
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    Chapter 56 Assessing Pseudomonas Virulence with a Nonmammalian Host: Drosophila melanogaster.
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    Chapter 57 Assessing Pseudomonas Virulence Using Host Cells
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    Chapter 58 Assessing Pseudomonas aeruginosa Virulence and the Host Response Using Murine Models of Acute and Chronic Lung Infection
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    Chapter 59 Assessing Pseudomonas Virulence Using Mammalian Models: Acute Infection Model
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    Chapter 60 Burn Mouse Models
Attention for Chapter 5: Genotyping Methods
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  • Above-average Attention Score compared to outputs of the same age and source (55th percentile)

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Chapter title
Genotyping Methods
Chapter number 5
Book title
Pseudomonas Methods and Protocols
Published in
Methods in molecular biology, January 2014
DOI 10.1007/978-1-4939-0473-0_5
Pubmed ID
Book ISBNs
978-1-4939-0472-3, 978-1-4939-0473-0
Authors

Burkhard Tümmler, Tümmler, Burkhard

X Demographics

X Demographics

The data shown below were collected from the profile of 1 X user who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 38 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
India 1 3%
Estonia 1 3%
Unknown 36 95%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 6 16%
Student > Master 5 13%
Professor 5 13%
Student > Bachelor 5 13%
Researcher 3 8%
Other 10 26%
Unknown 4 11%
Readers by discipline Count As %
Agricultural and Biological Sciences 15 39%
Biochemistry, Genetics and Molecular Biology 6 16%
Medicine and Dentistry 4 11%
Pharmacology, Toxicology and Pharmaceutical Science 2 5%
Veterinary Science and Veterinary Medicine 2 5%
Other 3 8%
Unknown 6 16%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 23 March 2019.
All research outputs
#15,506,823
of 23,045,021 outputs
Outputs from Methods in molecular biology
#5,403
of 13,194 outputs
Outputs of similar age
#191,636
of 306,691 outputs
Outputs of similar age from Methods in molecular biology
#199
of 589 outputs
Altmetric has tracked 23,045,021 research outputs across all sources so far. This one is in the 22nd percentile – i.e., 22% of other outputs scored the same or lower than it.
So far Altmetric has tracked 13,194 research outputs from this source. They receive a mean Attention Score of 3.4. This one is in the 44th percentile – i.e., 44% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 306,691 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 27th percentile – i.e., 27% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 589 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 55% of its contemporaries.