You are seeing a free-to-access but limited selection of the activity Altmetric has collected about this research output.
Click here to find out more.
X Demographics
Mendeley readers
Attention Score in Context
| Title |
HiFive: a tool suite for easy and efficient HiC and 5C data analysis
|
|---|---|
| Published in |
Genome Biology, October 2015
|
| DOI | 10.1186/s13059-015-0806-y |
| Pubmed ID | |
| Authors |
Michael EG Sauria, Jennifer E. Phillips-Cremins, Victor G. Corces, James Taylor |
| Abstract |
The chromatin interaction assays 5C and HiC have advanced our understanding of genomic spatial organization, but analysis approaches for these data are limited by usability and flexibility. The HiFive tool suite provides efficient data handling and a variety of normalization approaches for easy, fast analysis and method comparison. Integration of MPI-based parallelization allows scalability and rapid processing time. In addition to single-command analysis of an entire experiment from mapped reads to interaction values, HiFive has been integrated into the open-source, web-based platform Galaxy to connect users with computational resources and a graphical interface. HiFive is open-source software available from http://taylorlab.org/software/hifive/ . |
X Demographics
The data shown below were collected from the profiles of 21 X users who shared this research output. Click here to find out more about how the information was compiled.
Geographical breakdown
| Country | Count | As % |
|---|---|---|
| United States | 4 | 19% |
| United Kingdom | 3 | 14% |
| Spain | 1 | 5% |
| Germany | 1 | 5% |
| Italy | 1 | 5% |
| Brazil | 1 | 5% |
| France | 1 | 5% |
| Unknown | 9 | 43% |
Demographic breakdown
| Type | Count | As % |
|---|---|---|
| Scientists | 11 | 52% |
| Members of the public | 9 | 43% |
| Science communicators (journalists, bloggers, editors) | 1 | 5% |
Mendeley readers
The data shown below were compiled from readership statistics for 130 Mendeley readers of this research output. Click here to see the associated Mendeley record.
Geographical breakdown
| Country | Count | As % |
|---|---|---|
| United Kingdom | 2 | 2% |
| Germany | 1 | <1% |
| France | 1 | <1% |
| Lithuania | 1 | <1% |
| Norway | 1 | <1% |
| Denmark | 1 | <1% |
| Russia | 1 | <1% |
| Spain | 1 | <1% |
| Japan | 1 | <1% |
| Other | 1 | <1% |
| Unknown | 119 | 92% |
Demographic breakdown
| Readers by professional status | Count | As % |
|---|---|---|
| Student > Ph. D. Student | 36 | 28% |
| Researcher | 32 | 25% |
| Student > Bachelor | 12 | 9% |
| Student > Master | 9 | 7% |
| Professor | 7 | 5% |
| Other | 21 | 16% |
| Unknown | 13 | 10% |
| Readers by discipline | Count | As % |
|---|---|---|
| Agricultural and Biological Sciences | 51 | 39% |
| Biochemistry, Genetics and Molecular Biology | 38 | 29% |
| Computer Science | 12 | 9% |
| Engineering | 4 | 3% |
| Medicine and Dentistry | 3 | 2% |
| Other | 9 | 7% |
| Unknown | 13 | 10% |
Attention Score in Context
This research output has an Altmetric Attention Score of 11. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 25 November 2015.
All research outputs
#3,240,802
of 25,374,647 outputs
Outputs from Genome Biology
#2,346
of 4,467 outputs
Outputs of similar age
#43,510
of 294,731 outputs
Outputs of similar age from Genome Biology
#50
of 87 outputs
Altmetric has tracked 25,374,647 research outputs across all sources so far. Compared to these this one has done well and is in the 87th percentile: it's in the top 25% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 4,467 research outputs from this source. They typically receive a lot more attention than average, with a mean Attention Score of 27.6. This one is in the 47th percentile – i.e., 47% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 294,731 tracked outputs that were published within six weeks on either side of this one in any source. This one has done well, scoring higher than 85% of its contemporaries.
We're also able to compare this research output to 87 others from the same source and published within six weeks on either side of this one. This one is in the 41st percentile – i.e., 41% of its contemporaries scored the same or lower than it.