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Post-Transcriptional Gene Regulation

Overview of attention for book
Cover of 'Post-Transcriptional Gene Regulation'

Table of Contents

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    Book Overview
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    Chapter 1 Introduction to Bioinformatics Resources for Post-transcriptional Regulation of Gene Expression.
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    Chapter 2 Post-Transcriptional Gene Regulation
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    Chapter 3 Transcriptional Regulation with CRISPR/Cas9 Effectors in Mammalian Cells.
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    Chapter 4 Studying the Translatome with Polysome Profiling.
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    Chapter 5 Exploring Ribosome Positioning on Translating Transcripts with Ribosome Profiling.
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    Chapter 6 Post-Transcriptional Gene Regulation
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    Chapter 7 Use of the pBUTR Reporter System for Scalable Analysis of 3' UTR-Mediated Gene Regulation.
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    Chapter 8 Comprehensive Identification of RNA-Binding Proteins by RNA Interactome Capture.
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    Chapter 9 Identifying RBP Targets with RIP-seq.
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    Chapter 10 PAR-CLIP: A Method for Transcriptome-Wide Identification of RNA Binding Protein Interaction Sites.
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    Chapter 11 Profiling the Binding Sites of RNA-Binding Proteins with Nucleotide Resolution Using iCLIP.
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    Chapter 12 A Pipeline for PAR-CLIP Data Analysis.
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    Chapter 13 Capture and Identification of miRNA Targets by Biotin Pulldown and RNA-seq.
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    Chapter 14 Post-Transcriptional Gene Regulation
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    Chapter 15 Genome-Wide Analysis of A-to-I RNA Editing.
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    Chapter 16 Nucleotide-Level Profiling of m5C RNA Methylation
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    Chapter 17 Probing N (6)-methyladenosine (m(6)A) RNA Modification in Total RNA with SCARLET.
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    Chapter 18 Genome-Wide Identification of Alternative Polyadenylation Events Using 3'T-Fill.
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    Chapter 19 Genome-Wide Profiling of Alternative Translation Initiation Sites.
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    Chapter 20 Post-Transcriptional Gene Regulation
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    Chapter 21 Visualizing mRNA Dynamics in Live Neurons and Brain Tissues.
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    Chapter 22 Single-Molecule Live-Cell Visualization of Pre-mRNA Splicing.
Attention for Chapter 9: Identifying RBP Targets with RIP-seq.
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Chapter title
Identifying RBP Targets with RIP-seq.
Chapter number 9
Book title
Post-Transcriptional Gene Regulation
Published in
Methods in molecular biology, January 2016
DOI 10.1007/978-1-4939-3067-8_9
Pubmed ID
Book ISBNs
978-1-4939-3066-1, 978-1-4939-3067-8
Authors

Hans-Herman Wessels, Antje Hirsekorn, Uwe Ohler, Neelanjan Mukherjee, Wessels, Hans-Herman, Hirsekorn, Antje, Ohler, Uwe, Mukherjee, Neelanjan

Editors

Erik Dassi

Abstract

Throughout their lifetime RNA molecules interact with a variety of RNA-binding proteins (RBPs). RBPs control gene expression by regulating splicing, polyadenylation, editing, transport, stability, and translation of RNA. There are ~1500 RBPs encoded by the human genome and recent studies have detected ~1100 proteins directly interacting with polyadenylated RNA. Identifying the RNAs bound by RBPs will continue to provide important insights into the regulation of gene expression.

Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 35 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 1 3%
Italy 1 3%
Germany 1 3%
Unknown 32 91%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 13 37%
Researcher 10 29%
Student > Bachelor 3 9%
Student > Master 3 9%
Professor 2 6%
Other 2 6%
Unknown 2 6%
Readers by discipline Count As %
Agricultural and Biological Sciences 17 49%
Biochemistry, Genetics and Molecular Biology 13 37%
Pharmacology, Toxicology and Pharmaceutical Science 1 3%
Neuroscience 1 3%
Unknown 3 9%