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Identification of Tim4 as a phosphatidylserine receptor

Overview of attention for article published in Nature, October 2007
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  • In the top 25% of all research outputs scored by Altmetric
  • High Attention Score compared to outputs of the same age (95th percentile)
  • High Attention Score compared to outputs of the same age and source (84th percentile)

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1 blog
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3 X users
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28 patents
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Citations

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958 Dimensions

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678 Mendeley
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4 Connotea
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Title
Identification of Tim4 as a phosphatidylserine receptor
Published in
Nature, October 2007
DOI 10.1038/nature06307
Pubmed ID
Authors

Masanori Miyanishi, Kazutoshi Tada, Masato Koike, Yasuo Uchiyama, Toshio Kitamura, Shigekazu Nagata

Abstract

In programmed cell death, a large number of cells undergo apoptosis, and are engulfed by macrophages to avoid the release of noxious materials from the dying cells. In definitive erythropoiesis, nuclei are expelled from erythroid precursor cells and are engulfed by macrophages. Phosphatidylserine is exposed on the surface of apoptotic cells and on the nuclei expelled from erythroid precursor cells; it works as an 'eat me' signal for phagocytes. Phosphatidylserine is also expressed on the surface of exosomes involved in intercellular signalling. Here we established a library of hamster monoclonal antibodies against mouse peritoneal macrophages, and found an antibody that strongly inhibited the phosphatidylserine-dependent engulfment of apoptotic cells. The antigen recognized by the antibody was identified by expression cloning as a type I transmembrane protein called Tim4 (T-cell immunoglobulin- and mucin-domain-containing molecule; also known as Timd4). Tim4 was expressed in Mac1+ cells in various mouse tissues, including spleen, lymph nodes and fetal liver. Tim4 bound apoptotic cells by recognizing phosphatidylserine via its immunoglobulin domain. The expression of Tim4 in fibroblasts enhanced their ability to engulf apoptotic cells. When the anti-Tim4 monoclonal antibody was administered into mice, the engulfment of apoptotic cells by thymic macrophages was significantly blocked, and the mice developed autoantibodies. Among the other Tim family members, Tim1, but neither Tim2 nor Tim3, specifically bound phosphatidylserine. Tim1- or Tim4-expressing Ba/F3 B cells were bound by exosomes via phosphatidylserine, and exosomes stimulated the interaction between Tim1 and Tim4. These results indicate that Tim4 and Tim1 are phosphatidylserine receptors for the engulfment of apoptotic cells, and may also be involved in intercellular signalling in which exosomes are involved.

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X Demographics

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 678 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 7 1%
Netherlands 4 <1%
United Kingdom 4 <1%
France 3 <1%
Japan 3 <1%
Poland 2 <1%
Argentina 2 <1%
China 1 <1%
Norway 1 <1%
Other 1 <1%
Unknown 650 96%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 175 26%
Researcher 138 20%
Student > Master 64 9%
Student > Bachelor 57 8%
Professor > Associate Professor 40 6%
Other 107 16%
Unknown 97 14%
Readers by discipline Count As %
Agricultural and Biological Sciences 223 33%
Biochemistry, Genetics and Molecular Biology 116 17%
Medicine and Dentistry 84 12%
Immunology and Microbiology 72 11%
Chemistry 19 3%
Other 51 8%
Unknown 113 17%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 28. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 31 January 2024.
All research outputs
#1,421,698
of 26,017,215 outputs
Outputs from Nature
#37,462
of 99,074 outputs
Outputs of similar age
#2,801
of 92,404 outputs
Outputs of similar age from Nature
#86
of 565 outputs
Altmetric has tracked 26,017,215 research outputs across all sources so far. Compared to these this one has done particularly well and is in the 93rd percentile: it's in the top 10% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 99,074 research outputs from this source. They typically receive a lot more attention than average, with a mean Attention Score of 102.3. This one has gotten more attention than average, scoring higher than 61% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 92,404 tracked outputs that were published within six weeks on either side of this one in any source. This one has done particularly well, scoring higher than 95% of its contemporaries.
We're also able to compare this research output to 565 others from the same source and published within six weeks on either side of this one. This one has done well, scoring higher than 84% of its contemporaries.