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Evolutionary Genomics

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Cover of 'Evolutionary Genomics'

Table of Contents

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    Book Overview
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    Chapter 1 Tangled Trees: The Challenge of Inferring Species Trees from Coalescent and Noncoalescent Genes
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    Chapter 2 Modeling Gene Family Evolution and Reconciling Phylogenetic Discord
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    Chapter 3 Genome-wide comparative analysis of phylogenetic trees: the prokaryotic forest of life.
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    Chapter 4 Philosophy and Evolution: Minding the Gap Between Evolutionary Patterns and Tree-Like Patterns
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    Chapter 5 Selection on the Protein-Coding Genome
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    Chapter 6 Methods to Detect Selection on Noncoding DNA
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    Chapter 7 The Origin and Evolution of New Genes
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    Chapter 8 Evolution of protein domain architectures.
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    Chapter 9 Estimating recombination rates from genetic variation in humans.
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    Chapter 10 Evolution of Viral Genomes: Interplay Between Selection, Recombination, and Other Forces
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    Chapter 11 Association Mapping and Disease: Evolutionary Perspectives
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    Chapter 12 Ancestral Population Genomics
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    Chapter 13 Nonredundant Representation of Ancestral Recombinations Graphs
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    Chapter 14 Using Genomic Tools to Study Regulatory Evolution
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    Chapter 15 Characterization and Evolutionary Analysis of Protein–Protein Interaction Networks
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    Chapter 16 Statistical methods in metabolomics.
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    Chapter 17 Introduction to the Analysis of Environmental Sequences: Metagenomics with MEGAN
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    Chapter 18 Analyzing epigenome data in context of genome evolution and human diseases.
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    Chapter 19 Genetical Genomics for Evolutionary Studies
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    Chapter 20 Genomics Data Resources: Frameworks and Standards
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    Chapter 21 Sharing programming resources between bio* projects through remote procedure call and native call stack strategies.
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    Chapter 22 Scalable computing for evolutionary genomics.
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