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Plant Proteostasis

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Cover of 'Plant Proteostasis'

Table of Contents

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    Book Overview
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    Chapter 1 Approaches to Determine Protein Ubiquitination Residue Types
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    Chapter 2 Immunoprecipitation of Cullin-RING Ligases (CRLs) in Arabidopsis thaliana Seedlings
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    Chapter 3 Radioligand Binding Assays for Determining Dissociation Constants of Phytohormone Receptors
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    Chapter 4 Measuring the Enzyme Activity of Arabidopsis Deubiquitylating Enzymes
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    Chapter 5 Fluorescent Reporters for Ubiquitin-Dependent Proteolysis in Plants
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    Chapter 6 Generation of Artificial N-end Rule Substrate Proteins In Vivo and In Vitro
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    Chapter 7 Plant Proteostasis
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    Chapter 8 Plant Proteostasis
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    Chapter 9 Kinetic Analysis of Plant SUMO Conjugation Machinery
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    Chapter 10 Expression, Purification, and Enzymatic Analysis of Plant SUMO Proteases
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    Chapter 11 Quantitative Analysis of Subcellular Distribution of the SUMO Conjugation System by Confocal Microscopy Imaging
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    Chapter 12 Plant Proteostasis
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    Chapter 13 Plant Proteostasis
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    Chapter 14 Protocols for Studying Protein Stability in an Arabidopsis Protoplast Transient Expression System
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    Chapter 15 Detection and Quantification of Protein Aggregates in Plants.
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    Chapter 16 Determination of Protein Carbonylation and Proteasome Activity in Seeds
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    Chapter 17 Isobaric Tag for Relative and Absolute Quantitation (iTRAQ)-Based Protein Profiling in Plants
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    Chapter 18 Plant Proteostasis
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    Chapter 19 In Vivo Radiolabeling of Arabidopsis Chloroplast Proteins and Separation of Thylakoid Membrane Complexes by Blue Native PAGE
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    Chapter 20 Normalized Quantitative Western Blotting Based on Standardized Fluorescent Labeling
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    Chapter 21 Sequence Search and Comparative Genomic Analysis of SUMO-Activating Enzymes Using CoGe
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    Chapter 22 Plant Proteostasis
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    Chapter 23 Bioinformatics Tools for Exploring the SUMO Gene Network
Attention for Chapter 4: Measuring the Enzyme Activity of Arabidopsis Deubiquitylating Enzymes
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Chapter title
Measuring the Enzyme Activity of Arabidopsis Deubiquitylating Enzymes
Chapter number 4
Book title
Plant Proteostasis
Published in
Methods in molecular biology, January 2016
DOI 10.1007/978-1-4939-3759-2_4
Pubmed ID
Book ISBNs
978-1-4939-3757-8, 978-1-4939-3759-2
Authors

Kamila Kalinowska, Marie-Kristin Nagel, Erika Isono

Editors

L. Maria Lois, Rune Matthiesen

Abstract

Deubiquitylating enzymes, or DUBs, are important regulators of ubiquitin homeostasis and substrate stability, though the molecular mechanisms of most of the DUBs in plants are not yet understood. As different ubiquitin chain types are implicated in different biological pathways, it is important to analyze the enzyme characteristic for studying a DUB. Quantitative analysis of DUB activity is also important to determine enzyme kinetics and the influence of DUB binding proteins on the enzyme activity. Here, we show methods to analyze DUB activity using immunodetection, Coomassie Brilliant Blue staining, and fluorescence measurement that can be useful for understanding the basic characteristic of DUBs.

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Mendeley readers

The data shown below were compiled from readership statistics for 3 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 3 100%

Demographic breakdown

Readers by professional status Count As %
Other 1 33%
Unknown 2 67%
Readers by discipline Count As %
Biochemistry, Genetics and Molecular Biology 1 33%
Unknown 2 67%