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The genomic landscape shaped by selection on transposable elements across 18 mouse strains

Overview of attention for article published in Genome Biology, June 2012
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About this Attention Score

  • In the top 25% of all research outputs scored by Altmetric
  • High Attention Score compared to outputs of the same age (89th percentile)
  • Good Attention Score compared to outputs of the same age and source (67th percentile)

Mentioned by

blogs
1 blog
twitter
5 X users

Citations

dimensions_citation
161 Dimensions

Readers on

mendeley
260 Mendeley
citeulike
10 CiteULike
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Title
The genomic landscape shaped by selection on transposable elements across 18 mouse strains
Published in
Genome Biology, June 2012
DOI 10.1186/gb-2012-13-6-r45
Pubmed ID
Authors

Christoffer Nellåker, Thomas M Keane, Binnaz Yalcin, Kim Wong, Avigail Agam, T Grant Belgard, Jonathan Flint, David J Adams, Wayne N Frankel, Chris P Ponting

Abstract

Transposable element (TE)-derived sequence dominates the landscape of mammalian genomes and can modulate gene function by dysregulating transcription and translation. Our current knowledge of TEs in laboratory mouse strains is limited primarily to those present in the C57BL/6J reference genome, with most mouse TEs being drawn from three distinct classes, namely short interspersed nuclear elements (SINEs), long interspersed nuclear elements (LINEs) and the endogenous retrovirus (ERV) superfamily. Despite their high prevalence, the different genomic and gene properties controlling whether TEs are preferentially purged from, or are retained by, genetic drift or positive selection in mammalian genomes remain poorly defined.

X Demographics

X Demographics

The data shown below were collected from the profiles of 5 X users who shared this research output. Click here to find out more about how the information was compiled.
Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 260 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
United States 8 3%
United Kingdom 7 3%
Japan 5 2%
Germany 3 1%
Brazil 3 1%
France 2 <1%
Spain 2 <1%
Canada 2 <1%
Russia 2 <1%
Other 3 1%
Unknown 223 86%

Demographic breakdown

Readers by professional status Count As %
Researcher 79 30%
Student > Ph. D. Student 68 26%
Student > Master 15 6%
Professor 14 5%
Student > Bachelor 13 5%
Other 39 15%
Unknown 32 12%
Readers by discipline Count As %
Agricultural and Biological Sciences 120 46%
Biochemistry, Genetics and Molecular Biology 72 28%
Computer Science 13 5%
Neuroscience 4 2%
Immunology and Microbiology 3 1%
Other 11 4%
Unknown 37 14%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 12. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 20 June 2012.
All research outputs
#2,954,253
of 25,377,790 outputs
Outputs from Genome Biology
#2,214
of 4,467 outputs
Outputs of similar age
#18,707
of 179,567 outputs
Outputs of similar age from Genome Biology
#13
of 40 outputs
Altmetric has tracked 25,377,790 research outputs across all sources so far. Compared to these this one has done well and is in the 88th percentile: it's in the top 25% of all research outputs ever tracked by Altmetric.
So far Altmetric has tracked 4,467 research outputs from this source. They typically receive a lot more attention than average, with a mean Attention Score of 27.6. This one has gotten more attention than average, scoring higher than 50% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 179,567 tracked outputs that were published within six weeks on either side of this one in any source. This one has done well, scoring higher than 89% of its contemporaries.
We're also able to compare this research output to 40 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 67% of its contemporaries.