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Structural, Functional, and Evolutionary Characterization of Major Drought Transcription Factors Families in Maize

Overview of attention for article published in Frontiers in Chemistry, May 2018
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Title
Structural, Functional, and Evolutionary Characterization of Major Drought Transcription Factors Families in Maize
Published in
Frontiers in Chemistry, May 2018
DOI 10.3389/fchem.2018.00177
Pubmed ID
Authors

Shikha Mittal, Pooja Banduni, Mallana G. Mallikarjuna, Atmakuri R. Rao, Prashant A. Jain, Prasanta K. Dash, Nepolean Thirunavukkarasu

Abstract

Drought is one of the major threats to the maize yield especially in subtropical production systems. Understanding the genes and regulatory mechanisms of drought tolerance is important to sustain the yield. Transcription factors (TFs) play a major role in gene regulation under drought stress. In the present study, a set of 15 major TF families comprising 1,436 genes was structurally and functionally characterized. The functional annotation indicated that the genes were involved in ABA signaling, ROS scavenging, photosynthesis, stomatal regulation, and sucrose metabolism. Duplication was identified as the primary force in divergence and expansion of TF families. Phylogenetic relationship was developed for individual TF and combined TF families. Phylogenetic analysis clustered the genes into specific and mixed groups. Gene structure analysis revealed that more number of genes were intron-rich as compared to intron-less. Drought-responsive cis-regulatory elements such as ABREA, ABREB, DRE1, and DRECRTCOREAT have been identified. Expression and interaction analyses identified leaf-specific bZIP TF, GRMZM2G140355, as a potential contributor toward drought tolerance in maize. Protein-protein interaction network of 269 drought-responsive genes belonging to different TFs has been provided. The information generated on structural and functional characteristics, expression, and interaction of the drought-related TF families will be useful to decipher the drought tolerance mechanisms and to breed drought-tolerant genotypes in maize.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 49 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 49 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 9 18%
Student > Ph. D. Student 8 16%
Student > Master 8 16%
Student > Doctoral Student 3 6%
Professor 2 4%
Other 4 8%
Unknown 15 31%
Readers by discipline Count As %
Agricultural and Biological Sciences 15 31%
Biochemistry, Genetics and Molecular Biology 9 18%
Veterinary Science and Veterinary Medicine 1 2%
Immunology and Microbiology 1 2%
Psychology 1 2%
Other 0 0%
Unknown 22 45%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 2. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 20 September 2018.
All research outputs
#14,403,896
of 23,070,218 outputs
Outputs from Frontiers in Chemistry
#1,060
of 6,025 outputs
Outputs of similar age
#187,034
of 330,223 outputs
Outputs of similar age from Frontiers in Chemistry
#42
of 163 outputs
Altmetric has tracked 23,070,218 research outputs across all sources so far. This one is in the 35th percentile – i.e., 35% of other outputs scored the same or lower than it.
So far Altmetric has tracked 6,025 research outputs from this source. They receive a mean Attention Score of 2.0. This one has done well, scoring higher than 80% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 330,223 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 40th percentile – i.e., 40% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 163 others from the same source and published within six weeks on either side of this one. This one has gotten more attention than average, scoring higher than 73% of its contemporaries.