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Identification and Expression Analysis of Wheat TaGF14 Genes

Overview of attention for article published in Frontiers in Genetics, January 2018
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Title
Identification and Expression Analysis of Wheat TaGF14 Genes
Published in
Frontiers in Genetics, January 2018
DOI 10.3389/fgene.2018.00012
Pubmed ID
Authors

Jun Guo, Shuang Dai, Haosheng Li, Aifeng Liu, Cheng Liu, Dungong Cheng, Xinyou Cao, Xiusheng Chu, Shengnan Zhai, Jianjun Liu, Zhendong Zhao, Jianmin Song

Abstract

The 14-3-3 gene family members play key roles in various cellular processes. However, little is known about the numbers and roles of 14-3-3 genes in wheat. The aims of this study were to identifyTaGF14numbers in wheat by searching its whole genome through blast, to study the phylogenetic relationships with other plant species and to discuss the functions ofTaGF14s. The results showed that common wheat harbored 20TaGF14genes, located on wheat chromosome groups 2, 3, 4, and 7. Out of them, eighteenTaGF14sare non-ε proteins, and two wheatTaGF14genes,TaGF14iandTaGF14f, are ε proteins. Phylogenetic analysis indicated that these genes were divided into six clusters: cluster 1 (TaGF14d, TaGF14g, TaGF14j, TaGF14h, TaGF14c, andTaGF14n); cluster 2 (TaGF14k); cluster 3 (TaGF14b, TaGF14l, TaGF14m, andTaGF14s); cluster 4 (TaGF14a, TaGF14e, andTaGF14r); cluster 5 (TaGF14iandTaGF14f); and cluster 6 (TaGF14o, TaGF14p, TaGF14q, andTaGF14t). Tissue-specific gene expressions suggested that allTaGF14swere likely constitutively expressed, except two genes, i.e.,TaGF14pandTaGF14f. And the highest amount ofTaGF14transcripts were observed in developing grains at 20 days post anthesis (DPA), especially forTaGF14jandTaGF14l.After drought stress, five genes, i.e.,TaGF14c,TaGF14d,TaGF14g,TaGF14h, andTaGF14j, were up-regulated expression under drought stress for both 1 and 6 h, suggesting these genes played vital role in combating against drought stress. However, all theTaGF14swere down-regulated expression under heat stress for both 1 and 6 h, indicatingTaGF14smay be negatively associated with heat stress by reducing the expression to combat heat stress or through other pathways. These results suggested that cluster 1, e.g.,TaGF14j, may participate in the whole wheat developing stages, e.g., grain-filling (starch biosynthesis) and may also participate in combating against drought stress. Subsequently, a homolog ofTaGF14j,TaGF14-JM22, were cloned by RACE and used to validate its function. Immunoblotting results showed thatTaGF14-JM22protein, closely related toTaGF14d,TaGF14g, andTaGF14j, can interact with AGP-L, SSI, SSII, SBEIIa, and SBEIIb in developing grains, suggesting thatTaGF14slocated on group 4 may be involved in starch biosynthesis. Therefore, it is possible to develop starch-rich wheat cultivars by modifyingTaGF14s.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 17 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 17 100%

Demographic breakdown

Readers by professional status Count As %
Researcher 4 24%
Student > Ph. D. Student 2 12%
Student > Master 2 12%
Lecturer 1 6%
Professor > Associate Professor 1 6%
Other 0 0%
Unknown 7 41%
Readers by discipline Count As %
Agricultural and Biological Sciences 7 41%
Biochemistry, Genetics and Molecular Biology 3 18%
Unknown 7 41%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 1. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 15 February 2018.
All research outputs
#17,927,741
of 23,018,998 outputs
Outputs from Frontiers in Genetics
#6,168
of 12,073 outputs
Outputs of similar age
#309,708
of 440,320 outputs
Outputs of similar age from Frontiers in Genetics
#75
of 103 outputs
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So far Altmetric has tracked 12,073 research outputs from this source. They receive a mean Attention Score of 3.7. This one is in the 40th percentile – i.e., 40% of its peers scored the same or lower than it.
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