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Egypt's Red Sea coast: phylogenetic analysis of cultured microbial consortia in industrialized sites

Overview of attention for article published in Frontiers in Microbiology, August 2014
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Title
Egypt's Red Sea coast: phylogenetic analysis of cultured microbial consortia in industrialized sites
Published in
Frontiers in Microbiology, August 2014
DOI 10.3389/fmicb.2014.00363
Pubmed ID
Authors

Ghada A. Mustafa, Amr Abd-Elgawad, Alyaa M. Abdel-Haleem, Rania Siam

Abstract

The Red Sea possesses a unique geography, and its shores are rich in mangrove, macro-algal and coral reef ecosystems. Various sources of pollution affect Red Sea biota, including microbial life. We assessed the effects of industrialization on microbes along the Egyptian Red Sea coast at eight coastal sites and two lakes. The bacterial communities of sediment samples were analyzed using bacterial 16S rDNA pyrosequencing of V6-V4 hypervariable regions. The taxonomic assignment of 131,402 significant reads to major bacterial taxa revealed five main bacterial phyla dominating the sampled sites: Proteobacteria (68%), Firmicutes (13%), Fusobacteria (12%), Bacteriodetes (6%), and Spirochetes (0.03%). Further analysis revealed distinct bacterial consortia that primarily included (1) marine Vibrio spp.-suggesting a "marine Vibrio phenomenon"; (2) potential human pathogens; and (3) oil-degrading bacteria. We discuss two divergent microbial consortia that were sampled from Solar Lake West near Taba/Eilat and Saline Lake in Ras Muhammad; these consortia contained the highest abundance of human pathogens and no pathogens, respectively. Our results draw attention to the effects of industrialization on the Red Sea and suggest the need for further analysis to overcome the hazardous effects observed at the impacted sites.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 44 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 44 100%

Demographic breakdown

Readers by professional status Count As %
Student > Master 10 23%
Researcher 7 16%
Student > Ph. D. Student 6 14%
Student > Postgraduate 4 9%
Student > Bachelor 3 7%
Other 5 11%
Unknown 9 20%
Readers by discipline Count As %
Agricultural and Biological Sciences 11 25%
Environmental Science 8 18%
Biochemistry, Genetics and Molecular Biology 6 14%
Earth and Planetary Sciences 2 5%
Medicine and Dentistry 2 5%
Other 5 11%
Unknown 10 23%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 2. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 12 May 2016.
All research outputs
#15,171,422
of 25,381,783 outputs
Outputs from Frontiers in Microbiology
#12,186
of 29,173 outputs
Outputs of similar age
#117,773
of 238,569 outputs
Outputs of similar age from Frontiers in Microbiology
#89
of 169 outputs
Altmetric has tracked 25,381,783 research outputs across all sources so far. This one is in the 38th percentile – i.e., 38% of other outputs scored the same or lower than it.
So far Altmetric has tracked 29,173 research outputs from this source. They typically receive a little more attention than average, with a mean Attention Score of 6.5. This one has gotten more attention than average, scoring higher than 55% of its peers.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 238,569 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 49th percentile – i.e., 49% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 169 others from the same source and published within six weeks on either side of this one. This one is in the 46th percentile – i.e., 46% of its contemporaries scored the same or lower than it.