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Antibiotic Effects on Microbial Communities Responsible for Denitrification and N2O Production in Grassland Soils

Overview of attention for article published in Frontiers in Microbiology, September 2018
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Title
Antibiotic Effects on Microbial Communities Responsible for Denitrification and N2O Production in Grassland Soils
Published in
Frontiers in Microbiology, September 2018
DOI 10.3389/fmicb.2018.02121
Pubmed ID
Authors

Miguel Semedo, Bongkeun Song, Tavis Sparrer, Rebecca L. Phillips

Abstract

Antibiotics in soils may affect the structure and function of microbial communities. In this study, we investigated the acute effects of tetracycline on soil microbial community composition and production of nitrous oxide (N2O) and dinitrogen (N2) as the end-products of denitrification. Grassland soils were pre-incubated with and without tetracycline for 1-week prior to measurements of N2O and N2 production in soil slurries along with the analysis of prokaryotic and fungal communities by quantitative polymerase chain reaction (qPCR) and next-generation sequencing. Abundance and taxonomic composition of bacteria carrying two genotypes of N2O reductase genes (nosZ-I and nosZ-II) were evaluated through qPCR and metabolic inference. Soil samples treated with tetracycline generated 12 times more N2O, but N2 production was reduced by 84% compared to the control. In parallel with greater N2O production, we observed an increase in the fungi:bacteria ratio and a significant decrease in the abundance of nosZ-II carrying bacteria; nosZ-I abundance was not affected. NosZ-II-carrying Bacillus spp. (Firmicutes) and Anaeromyxobacter spp. (Deltaproteobacteria) were particularly susceptible to tetracycline and may serve as a crucial N2O sink in grassland soils. Our study indicates that the introduction of antibiotics to agroecosystems may promote higher N2O production due to the inhibitory effects on nosZ-II-carrying communities.

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Mendeley readers

Mendeley readers

The data shown below were compiled from readership statistics for 96 Mendeley readers of this research output. Click here to see the associated Mendeley record.

Geographical breakdown

Country Count As %
Unknown 96 100%

Demographic breakdown

Readers by professional status Count As %
Student > Ph. D. Student 20 21%
Researcher 14 15%
Student > Master 12 13%
Student > Bachelor 10 10%
Student > Doctoral Student 4 4%
Other 8 8%
Unknown 28 29%
Readers by discipline Count As %
Environmental Science 21 22%
Agricultural and Biological Sciences 17 18%
Biochemistry, Genetics and Molecular Biology 12 13%
Immunology and Microbiology 5 5%
Medicine and Dentistry 2 2%
Other 5 5%
Unknown 34 35%
Attention Score in Context

Attention Score in Context

This research output has an Altmetric Attention Score of 2. This is our high-level measure of the quality and quantity of online attention that it has received. This Attention Score, as well as the ranking and number of research outputs shown below, was calculated when the research output was last mentioned on 08 October 2018.
All research outputs
#15,018,906
of 23,103,436 outputs
Outputs from Frontiers in Microbiology
#14,043
of 25,285 outputs
Outputs of similar age
#201,699
of 337,559 outputs
Outputs of similar age from Frontiers in Microbiology
#419
of 697 outputs
Altmetric has tracked 23,103,436 research outputs across all sources so far. This one is in the 32nd percentile – i.e., 32% of other outputs scored the same or lower than it.
So far Altmetric has tracked 25,285 research outputs from this source. They typically receive a little more attention than average, with a mean Attention Score of 6.4. This one is in the 39th percentile – i.e., 39% of its peers scored the same or lower than it.
Older research outputs will score higher simply because they've had more time to accumulate mentions. To account for age we can compare this Altmetric Attention Score to the 337,559 tracked outputs that were published within six weeks on either side of this one in any source. This one is in the 37th percentile – i.e., 37% of its contemporaries scored the same or lower than it.
We're also able to compare this research output to 697 others from the same source and published within six weeks on either side of this one. This one is in the 35th percentile – i.e., 35% of its contemporaries scored the same or lower than it.